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Report for CCDS8658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8658.1 Public Homo sapiens 12 GPRC5D 24 110 108 CCDS HistoryNCBI Gene:55507Re-query CCDS DB by CCDS ID:8658.1Re-query CCDS DB by GeneID:55507See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228887.6 ENSP00000228887.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000228887.6Link to Ensembl Protein Viewer:ENSP00000228887.1Re-query CCDS DB by Nucleotide ID:ENST00000228887Re-query CCDS DB by Protein ID:ENSP00000228887
Original member Current member NCBI NM_018654.2 NP_061124.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018654.2Link to Protein Sequence:NP_061124.1Re-query CCDS DB by Nucleotide ID:NM_018654Re-query CCDS DB by Protein ID:NP_061124Link to BLAST:NP_061124.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061124.1 345 Q9NZD1-1 345 100% 0 0

Chromosomal Locations for CCDS 8658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 12940775 12940849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 12942261 12942328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 12949490 12950384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGTACAAGGACTGCATCGAGTCCACTGGAGACTATTTTCTTCTCTGTGACGCCGAGGGGCCATGGGGCA
TCATTCTGGAGTCCCTGGCCATACTTGGCATCGTGGTCACAATTCTGCTACTCTTAGCATTTCTCTTCCT
CATGCGAAAGATCCAAGACTGCAGCCAGTGGAATGTCCTCCCCACCCAGCTCCTCTTCCTCCTGAGTGTC
CTGGGGCTCTTCGGACTCGCTTTTGCCTTCATCATCGAGCTCAATCAACAAACTGCCCCCGTACGCTACT
TTCTCTTTGGGGTTCTCTTTGCTCTCTGTTTCTCATGCCTCTTAGCTCATGCCTCCAATCTAGTGAAGCT
GGTTCGGGGTTGTGTCTCCTTCTCCTGGACGACAATTCTGTGCATTGCTATTGGTTGCAGTCTGTTGCAA
ATCATTATTGCCACTGAGTATGTGACTCTCATCATGACCAGAGGTATGATGTTTGTGAATATGACACCCT
GCCAGCTCAATGTGGACTTTGTTGTACTCCTGGTCTATGTCCTCTTCCTGATGGCCCTCACATTCTTCGT
CTCCAAAGCCACCTTCTGTGGCCCGTGTGAGAACTGGAAGCAGCATGGAAGGCTCATCTTTATCACTGTG
CTCTTCTCCATCATCATCTGGGTGGTGTGGATCTCCATGCTCCTGAGAGGCAACCCGCAGTTCCAGCGAC
AGCCCCAGTGGGACGACCCGGTCGTCTGCATTGCTCTGGTCACCAACGCATGGGTTTTCCTGCTGCTGTA
CATCGTCCCTGAGCTCTGCATTCTCTACAGATCGTGTAGACAGGAGTGCCCTTTACAAGGCAATGCCTGC
CCCGTCACAGCCTACCAACACAGCTTCCAAGTGGAGAACCAGGAGCTCTCCAGAGCCCGAGACAGTGATG
GAGCTGAGGAGGATGTAGCATTAACTTCATATGGTACTCCCATTCAGCCGCAGACTGTTGATCCCACACA
AGAGTGTTTCATCCCACAGGCTAAACTAAGCCCCCAGCAAGATGCAGGAGGAGTATAA

Translation (345 aa):
MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQDCSQWNVLPTQLLFLLSV
LGLFGLAFAFIIELNQQTAPVRYFLFGVLFALCFSCLLAHASNLVKLVRGCVSFSWTTILCIAIGCSLLQ
IIIATEYVTLIMTRGMMFVNMTPCQLNVDFVVLLVYVLFLMALTFFVSKATFCGPCENWKQHGRLIFITV
LFSIIIWVVWISMLLRGNPQFQRQPQWDDPVVCIALVTNAWVFLLLYIVPELCILYRSCRQECPLQGNAC
PVTAYQHSFQVENQELSRARDSDGAEEDVALTSYGTPIQPQTVDPTQECFIPQAKLSPQQDAGGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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