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Report for CCDS82820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82820.1 Public Homo sapiens 3 NEPRO 24 110 108 CCDS HistoryNCBI Gene:25871Re-query CCDS DB by CCDS ID:82820.1Re-query CCDS DB by GeneID:25871See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82820.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383675.6 ENSP00000373173.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383675.6Link to Ensembl Protein Viewer:ENSP00000373173.2Re-query CCDS DB by Nucleotide ID:ENST00000383675Re-query CCDS DB by Protein ID:ENSP00000373173
Original member Current member NCBI NM_001319109.2 NP_001306038.1 Accepted alive Link to Nucleotide Sequence:NM_001319109.2Link to Protein Sequence:NP_001306038.1Re-query CCDS DB by Nucleotide ID:NM_001319109Re-query CCDS DB by Protein ID:NP_001306038Link to BLAST:NP_001306038.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001306038.1 497 Q6NW34-2 497 100% 0 0

Chromosomal Locations for CCDS 82820.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 113005536 113006004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113008171 113008430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113010643 113010704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113011045 113011406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113013953 113014032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113017448 113017602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 113019542 113019647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1494 nt):
ATGATGGCTGCGGTGCCGCCGGGCCTGGAGCCGTGGAACCGTGTGAGAATCCCTAAGGCGGGGAACCGCA
GCGCAGTGACAGTGCAGAACCCCGGCGCGGCCCTTGACCTTTGCATTGCAGCTGTAATTAAAGAATGCCA
TCTCGTCATACTGTCGCTGAAGAGCCAAACCTTAGATGCAGAAACAGATGTGTTATGTGCAGTCCTTTAC
AGCAATCACAACAGAATGGGCCGCCACAAACCCCATTTGGCCCTCAAACAGGTTGAGCAATGTTTAAAGC
GTTTGAAAAACATGAATTTGGAGGGCTCAATTCAAGACCTGTTTGAGTTGTTTTCTTCCAAGGTTCTCTA
TAAAGGTGTCTTAAAAAGGTTGATTTTGTTATATGAGCCTTTGTTTGGATTGCTTCAAGAGGTCGCTAGG
ATTCAACCAATGCCTTACTTCAAAGATTTTACCTTTCCTTCTGATATCACTGAATTTTTAGGACAGCCAT
ATTTTGAAGCCTTTAAGAAAAAAATGCCTATAGCTTTTGCAGCTAAAGGAATAAATAAATTGCTAAATAA
ACTGTTTTTAATAAATGAGCAGTCACCAAGAGCCAGTGAAGAAACCTTGCTTGGAATTTCAAAAAAAGCT
AAACAAATGAAGATCAATGTACAGAATAATGTGGATCTTGGACAGCCAGTAAAGAATAAGAGAGTCTTCA
AAGAAGAGTCATCAGAATTTGATGTGAGGGCTTTCTGCAACCAGCTGAAACACAAAGCTACTCAGGAGAC
CAGTTTTGATTTTAAATGTTCTCAATCCAGACTAAAGACAACCAAGTATTCTTCTCAGAAAGTGATAGGA
ACTCCTCATGCCAAAAGTTTTGTGCAAAGATTCCGAGAGGCTGAGTCCTTCACACAACTTTCTGAAGAAA
TCCAGATGGCAGTTGTATGGTGCAGGAGCAAAAAACTCAAGGCTCAGGCCATTTTTCTGGGTAACAAACT
TCTTAAAAGCAACCGGCTTAAACATCTGGAAGCTCAAGGTACTAGTTTGCCAAAGAAACTAGAGTGCATA
AAAACGTCTATTTGCAACCACCTTCTTCGTGGCTCAGGTATCAAAACTTCAAAGCATCATCTGAGACAGA
GAAGATCACAGAATAAATTTTTACGGAGACAAAGGAAACCACAGAGAAAGTTGCAGTCGACTCTTTTAAG
GGAAATTCAGCAGTTCTCTCAAGGGACTCGGAAGAGTGCTACAGATACCAGTGCTAAGTGGAGACTCTCA
CACTGTACTGTGCATAGAACTGATCTCTACCCTAACAGTAAGCAGCTCTTGAATAGTGGAGTTTCAATGC
CTGTCATACAAACTAAGGAGAAAATGATTCATGAAAATCTTAGAGGCATCCATGAAAATGAAACTGATTC
GTGGACGGTGATGCAAATAAATAAAAACAGTACATCAGGAACCATTAAGGAGACAGATGACATTGATGAT
ATTTTTGCTTTAATGGGAGTTTAG

Translation (497 aa):
MMAAVPPGLEPWNRVRIPKAGNRSAVTVQNPGAALDLCIAAVIKECHLVILSLKSQTLDAETDVLCAVLY
SNHNRMGRHKPHLALKQVEQCLKRLKNMNLEGSIQDLFELFSSKVLYKGVLKRLILLYEPLFGLLQEVAR
IQPMPYFKDFTFPSDITEFLGQPYFEAFKKKMPIAFAAKGINKLLNKLFLINEQSPRASEETLLGISKKA
KQMKINVQNNVDLGQPVKNKRVFKEESSEFDVRAFCNQLKHKATQETSFDFKCSQSRLKTTKYSSQKVIG
TPHAKSFVQRFREAESFTQLSEEIQMAVVWCRSKKLKAQAIFLGNKLLKSNRLKHLEAQGTSLPKKLECI
KTSICNHLLRGSGIKTSKHHLRQRRSQNKFLRRQRKPQRKLQSTLLREIQQFSQGTRKSATDTSAKWRLS
HCTVHRTDLYPNSKQLLNSGVSMPVIQTKEKMIHENLRGIHENETDSWTVMQINKNSTSGTIKETDDIDD
IFALMGV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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