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Report for CCDS82349.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82349.1 Public Homo sapiens 19 RPS16 24 110 108 CCDS HistoryNCBI Gene:6217Re-query CCDS DB by CCDS ID:82349.1Re-query CCDS DB by GeneID:6217See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82349.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000601655.5 ENSP00000472231.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601655.5Link to Ensembl Protein Viewer:ENSP00000472231.1Re-query CCDS DB by Nucleotide ID:ENST00000601655Re-query CCDS DB by Protein ID:ENSP00000472231
Original member Current member NCBI NM_001321111.2 NP_001308040.1 Accepted alive Link to Nucleotide Sequence:NM_001321111.2Link to Protein Sequence:NP_001308040.1Re-query CCDS DB by Nucleotide ID:NM_001321111Re-query CCDS DB by Protein ID:NP_001308040Link to BLAST:NP_001308040.1

Chromosomal Locations for CCDS 82349.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39433273 39433418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39433522 39433569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39433665 39433761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39435658 39435708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39435848 39435895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGCCGTCCAAGGGCCCGCTGCAGTCTGTGCAGGTCTTCGGACGCAAGAAGACAGCGACAGCTGTGGCGC
ACTGCAAACGCGGCAATGGTCTCATCAAGCTGCTGGAGCCAGTTCTGCTTCTCGGCAAGGAGCGATTTGC
TGGTGTAGACATCCGTGTCCGTGTAAAGGGTGGTGGTCACGTGGCCCAGATTTATGCTATCCGTCAGTCC
ATCTCCAAAGCCCTGGTGGCCTATTACCAGAAATATGTGGATGAGGCTTCCAAGAAGGAGATCAAAGACA
TCCTCATCCAGTATGACCGGACCCTGCTGGTAGCTGACCCTCGTCGCTGCGAGTCCAAAAAGTTTGGAGG
CCCTGGTGCCCGCGCTCGCTACCAGAAATCCTACCGATAA

Translation (129 aa):
MPSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQS
ISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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