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Report for CCDS81599.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81599.1 Public Homo sapiens 11 GVQW3 24 110 108 CCDS HistoryNCBI Gene:100506127Re-query CCDS DB by CCDS ID:81599.1Re-query CCDS DB by GeneID:100506127See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81599.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530460.2 ENSP00000489606.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530460.2Link to Ensembl Protein Viewer:ENSP00000489606.1Re-query CCDS DB by Nucleotide ID:ENST00000530460Re-query CCDS DB by Protein ID:ENSP00000489606
Original member Current member EBI ENST00000607673.2 ENSP00000499448.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000607673.2Link to Ensembl Protein Viewer:ENSP00000499448.1Re-query CCDS DB by Nucleotide ID:ENST00000607673Re-query CCDS DB by Protein ID:ENSP00000499448
Original member Current member EBI ENST00000663165.1 ENSP00000499610.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000663165.1Link to Ensembl Protein Viewer:ENSP00000499610.1Re-query CCDS DB by Nucleotide ID:ENST00000663165Re-query CCDS DB by Protein ID:ENSP00000499610
Original member Current member NCBI NM_001305225.4 NP_001292154.1 Accepted alive Link to Nucleotide Sequence:NM_001305225.4Link to Protein Sequence:NP_001292154.1Re-query CCDS DB by Nucleotide ID:NM_001305225Re-query CCDS DB by Protein ID:NP_001292154Link to BLAST:NP_001292154.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001292154.1 210 Q3ZCU0-2 210 100% 0 0

Chromosomal Locations for CCDS 81599.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 76381829 76382461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGAGTGACCGCTATTTAGAACAAAGGATTAGTATCAAATTTTGCGTGAAATTGAACAAGTCTGCAAGTG
AGACCCACCATCTTTTAAAAGAAGCTTATGGGGATGAAGTCATGTCAAGGGCCAGAGTTTTTGACTGGCA
CAAAAGGTTTAAAGAAGGACGGGAAGATGTTCGAGATGATGCCCGAAGTGGGCGTCCAGTCACCCACCGA
ACAGATGACAATATCCAGAAGGTCAAGGACTTGGTTTGTTCAAACAGGCAGTTAACCGTGAGGATGATGG
CTGAAGAGTTAAATTTAGACAAAGAAACTGTTAGGCTCATTTTGAAAGAAAACTTGAACATGAGGAAGAT
TTCTGCAAAAGTTATTTCGGGTGTTTTGAAGGGTGAGCCTAAACCACGAAAACTTGACTTTCGGTCCGAT
CTTTCAAAGGAAACTAGGAAAAATAGCTCATGTTTGAGGAAAAAGGTAACAGGTTCTGAAACATGGAGTT
ATCTCCAGGGTGAAGCTGGTGGGGAAATGCCCCTGCCGGTATCCCATCCCAGAGTCCACTACTCTGCCAG
TCAGCTTCTGCAGGCGTCATCTTCAACAAGCCTTCCCCCCAGGGTAGCTGAGAATTGGTTCACCCCATGG
TGA

Translation (210 aa):
MSDRYLEQRISIKFCVKLNKSASETHHLLKEAYGDEVMSRARVFDWHKRFKEGREDVRDDARSGRPVTHR
TDDNIQKVKDLVCSNRQLTVRMMAEELNLDKETVRLILKENLNMRKISAKVISGVLKGEPKPRKLDFRSD
LSKETRKNSSCLRKKVTGSETWSYLQGEAGGEMPLPVSHPRVHYSASQLLQASSSTSLPPRVAENWFTPW


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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