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Report for CCDS81418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81418.1 Public Homo sapiens 1 TMCC2 24 110 108 CCDS HistoryNCBI Gene:9911Re-query CCDS DB by CCDS ID:81418.1Re-query CCDS DB by GeneID:9911See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81418.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330675.12 ENSP00000331842.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000330675.12Link to Ensembl Protein Viewer:ENSP00000331842.7Re-query CCDS DB by Nucleotide ID:ENST00000330675Re-query CCDS DB by Protein ID:ENSP00000331842
Original member Current member NCBI NM_001331034.1 NP_001317963.1 Accepted alive Link to Nucleotide Sequence:NM_001331034.1Link to Protein Sequence:NP_001317963.1Re-query CCDS DB by Nucleotide ID:NM_001331034Re-query CCDS DB by Protein ID:NP_001317963Link to BLAST:NP_001317963.1

Chromosomal Locations for CCDS 81418.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 205257205 205257366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205268950 205269884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205271120 205271255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 205271813 205272124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGCGGCTGCAGAGTCTGGGAACTCAGGCACACCTGCTCGCAGCCCAGTGCTGCCCAGGGTCTGTGACC
CCGGGGGCCTGACACAGTCCGCAGACAGCTGGGGCCTCAGAGCCCCGGGTACCTCATCGCCGGCACGGCT
TCGGGAAACAGTGCCCACACAGGTCGATAAGGGAGACCTGGTGGCCCTGAGCCTCCCCGCCGGCCATGGT
GACACCGACGGCCCCATCAGCCTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGCCA
TTGACCACCTGCACCAGAAGATCCTGAAGATCACCGAGCAGATCAAGATTGAGCAGGAGGCTCGCGACGA
CAATGTGGCAGAGTATCTGAAACTGGCCAACAACGCGGACAAGCAGCAGGTGTCACGCATCAAGCAAGTG
TTCGAGAAGAAGAACCAGAAGTCAGCCCAGACCATCGCCCAGCTGCACAAGAAGCTGGAGCACTACCGCC
GGCGCCTGAAGGAGATTGAGCAGAACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGGACATGCAGCA
GGGGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCATCAGCGGCTTTGGGGGCGGCGTGGTGGAGGGC
GTCAAGGGCAGCCTCTCTGGCCTCTCACAGGCCACCCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTG
CCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGACAACATCGCCCACCTGAAGGACCCCCTGGAAGATGG
GCCCCCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGC
GATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAGGCAGCAACTCTGGGGCTGGGCCTGGTG
GGGCGCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCTGGAAACCTGGATGCTCTGCTGGAAGA
GCTACGGGAGATCAAGGAGGGACAGTCTCACCTGGAGGACTCCATGGAAGACCTGAAGACTCAGCTGCAG
AGGGACTACACCTACATGACCCAGTGCCTGCAGGAGGAGCGCTACAGGTACGAGCGGCTGGAGGAGCAGC
TCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGAACCTGAAGCAGGAGCTGGCCAGCATGGAGGA
GAAGGTGGCCTACCAGTCCTATGAGAGGGCACGGGACATCCAGGAGGCCGTGGAGTCCTGCCTGACCCGG
GTCACCAAGCTGGAGCTGCAGCAGCAACAGCAGCAGGTGGTACAGCTGGAGGGCGTGGAGAATGCCAACG
CGCGGGCGCTGCTGGGCAAGTTCATCAACGTGATCCTGGCGCTCATGGCCGTGCTGCTGGTGTTCGTGTC
CACCATCGCCAACTTCATCACGCCCCTCATGAAGACACGCCTGCGCATCACCAGCACCACCCTCCTGGTC
CTCGTCCTGTTCCTCCTCTGGAAGCACTGGGACTCCCTCACCTACCTCCTGGAGCACGTGTTGCTGCCCA
GCTGA

Translation (514 aa):
MAAAESGNSGTPARSPVLPRVCDPGGLTQSADSWGLRAPGTSSPARLRETVPTQVDKGDLVALSLPAGHG
DTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQV
FEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEG
VKGSLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGS
DDECSSASASSAGAGSNSGAGPGGALGSPKSNALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKTQLQ
RDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTR
VTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTTLLV
LVLFLLWKHWDSLTYLLEHVLLPS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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