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Report for CCDS81035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81035.1 Public Mus musculus 9 Zfp280d 23 108 98 CCDS HistoryNCBI Gene:235469Re-query CCDS DB by CCDS ID:81035.1Re-query CCDS DB by GeneID:235469See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81035.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000183410.7 ENSMUSP00000139250.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183410.7Link to Ensembl Protein Viewer:ENSMUSP00000139250.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183410Re-query CCDS DB by Protein ID:ENSMUSP00000139250
Original member Current member NCBI NM_001311105.1 NP_001298034.1 Accepted alive Link to Nucleotide Sequence:NM_001311105.1Link to Protein Sequence:NP_001298034.1Re-query CCDS DB by Nucleotide ID:NM_001311105Re-query CCDS DB by Protein ID:NP_001298034Link to BLAST:NP_001298034.1

Chromosomal Locations for CCDS 81035.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 72295320 72295322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72295975 72296035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72298702 72298848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72301701 72301766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72301867 72302006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72307951 72308068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72312078 72312248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72312651 72312760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72319092 72319315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72322453 72322610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72323000 72323100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72324008 72324154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72329028 72329162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72330866 72331173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72331293 72331433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72335047 72335109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72338746 72338864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72339012 72339048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72360286 72360341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 72361934 72362028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2400 nt):
ATGGTGACAACATATATAAAGTCAGATCTGCAACTTGATGGGAGACAGTTCTTTCAACCAAAAGATAATT
TAAAAATGGCAGAACTCTTTATGGAATGTGAAGAAGAGGAGCTAGAGCCATGGCAGAAGAAAGTGAAAGA
AGTCGAAGAGGATGATGATGATGAGCCCATCTTTGTTGCAGAGATAGCAAGTTCAAAGCCAGCTATTTCA
AATATTTTGAACAGAGTTAACCCCAGCTCTCATTCAAGAGGAATAAAGAATGGTATACTCAATCGAGGTT
TTACTGCTTCATTCAAGCCTACAAGTCAACGCTGCCTGAATTCAGCATCAAATCCTGTGGCTGCCTTGCC
AGTAAATTTTCATCCTGAATCTAGATCTTCAGATAGCTCTGTTATTGTTCAGCCATTTTCTAAACCTGGT
TATGTAACAAATTCACCAAGAGTTCTGTCTAATAACTCTTCAGAGTTACTGTTTGACTTGACCCAGGATA
CAGGATTATCACATTACCAGGGGGGACCGACACTTTCTATTGCAGGTTTGAATGAAACTTCATTTTTATC
AAAACGTCCTTCTGGTTCTGACATAAGCAGTGTTAACCCAAAAAAGCCTAAACCCAGTGAAAATACTTCT
GGAATAGATGCCTCTTCTGTAATCTCTTCAGAAAAGTCCCCATCAGTGATATCTCTCCAAGTGGTGCCAT
CGCAAGGTGCAAATTGTTCATCAAGTCAATCTAAAAATGGAACAACTTTTCCAAGAGCATGTCCCAAGTG
TGATATTCACTTCAATCTTTTGGATCCTCTAAAAAATCACATGACGTATTGTTGTCCAGACATGATAAAT
AACTTTTTGGGATTGACTAAAGCAGACAATTTAAATTCAGCAAATGAAGCTAAGACTCTTGAATCAGAGA
AAGGAAAATTGATAATGTTAGTTAATGACTTTTATTACGGAAAACATGAAGGAGACGTCCTGGAAGAACA
GAAGACTCATACAACCTTTAAGTGCTTCAGTTGCTTAAAAGTTCTCAAAAATAATATTAGGTTTATGAAC
CACATGAAGCACCATTTGGAGCTCGAGAAGCAGAGCAGCGAGAGCTGGGAGAAGCACACCACGTGCCAGC
ACTGCTACCGGCAGTTCCCCACGCCCTTCCAGCTCCAGTGCCACATCGAGAGCACCCACACTCCTCATGA
GTTCTCCACCATTTGTAAGATCTGTGAGCTATCATTTGAAACTGAACAGATTCTCTTACAACATATGAAG
GATAACCATAAGCCTGGTGAAATGCCATACATCTGCCAGGTTTGCAATTACAGATCATCATTATTTTCTG
AGGTAGAGTCTCATTTTAGAACATCACATGAAAACACTAAGAATTTGCTATGTCCATTCTGCCTCAAAGT
TATTAAAATCGCCACGCCCTATATGCATCATTACATGAAGCATCAGAAAAAGGGAATACATCGTTGCACC
AAATGCAGACTGCAGTTTTTGACATGCAAGGAAAAAATGGATCACAAGACTCAACATCACCGAACATTTG
TAAAACCCAAGCAACTGGAAGGACTTCCCCCTGGAACAAAAGTTACTATTCGAGCTTCAGTTGGACCTCT
TCAGTCAGGATCTTCAGTTACACCTTCTATCAGCCCAAGCACTTCTACCCTCCAGCTCTCACCTCCAGAG
CCTGACAATGTAACTGCTAAAAATCACGTGAAGTTGACTACAAGTACACCAAACACAACCATATCTGACC
CCAGTAAAGCTAATGAGACCAAGTCTAATGGCAGTAAATCTAAAAACAAGTCAAAAGTCTCCAACATGCA
GAAGAAACAAAGCACATTGTCTAGTAGTAATAAAAAAAGCAAAGTAAACACAGCACTAAGGAACTTAAGG
TTACGTCGGGGTGTTCACGAGTGTATTGAGTGTTCTTCTGAAGTAAAAGATTTTGCAAACCATTTTCCTA
CATATGTCCACTGTAGTTTTTGCAGATATAACACTAGCTGTAGCAAAGCCTATGTAAATCATATGATGAG
CTTTCATAGTAACCGTCCAAGTAAAAGATACTGTATATTTAAGAAGCATTCAGAAAATCTCAGGGGCATT
TCTCTAGTGTGCCTTAATTGTGATTTCCTAACTGACGTTTCTGGCTTAGATAATATGGCTACACACTTAA
GTCAGCATGAAACTCATTCTTGCCGAGTTCTAGTAGAGCAAGTTTCTGTTTGTATCCCAACTTCTGAACG
TCTTTCTGAGAAACAGCAAGACATAGTAGAGCTGAAGGAGAGCCAGGAGCATCACATTCTGGAAGTAAGC
AGGATAAAGTTCCTTCATCAGAAGAAGGCACTGGGTGTGATGCAAGTGTATGTGAAGCTGCAGCAGCAAC
ACACTGTGAAAAAGATGTAA

Translation (799 aa):
MVTTYIKSDLQLDGRQFFQPKDNLKMAELFMECEEEELEPWQKKVKEVEEDDDDEPIFVAEIASSKPAIS
NILNRVNPSSHSRGIKNGILNRGFTASFKPTSQRCLNSASNPVAALPVNFHPESRSSDSSVIVQPFSKPG
YVTNSPRVLSNNSSELLFDLTQDTGLSHYQGGPTLSIAGLNETSFLSKRPSGSDISSVNPKKPKPSENTS
GIDASSVISSEKSPSVISLQVVPSQGANCSSSQSKNGTTFPRACPKCDIHFNLLDPLKNHMTYCCPDMIN
NFLGLTKADNLNSANEAKTLESEKGKLIMLVNDFYYGKHEGDVLEEQKTHTTFKCFSCLKVLKNNIRFMN
HMKHHLELEKQSSESWEKHTTCQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETEQILLQHMK
DNHKPGEMPYICQVCNYRSSLFSEVESHFRTSHENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCT
KCRLQFLTCKEKMDHKTQHHRTFVKPKQLEGLPPGTKVTIRASVGPLQSGSSVTPSISPSTSTLQLSPPE
PDNVTAKNHVKLTTSTPNTTISDPSKANETKSNGSKSKNKSKVSNMQKKQSTLSSSNKKSKVNTALRNLR
LRRGVHECIECSSEVKDFANHFPTYVHCSFCRYNTSCSKAYVNHMMSFHSNRPSKRYCIFKKHSENLRGI
SLVCLNCDFLTDVSGLDNMATHLSQHETHSCRVLVEQVSVCIPTSERLSEKQQDIVELKESQEHHILEVS
RIKFLHQKKALGVMQVYVKLQQQHTVKKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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