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Report for CCDS77997.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77997.1 Public Homo sapiens 5 DAP 24 110 108 CCDS HistoryNCBI Gene:1611Re-query CCDS DB by CCDS ID:77997.1Re-query CCDS DB by GeneID:1611See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77997.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432074.2 ENSP00000394163.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432074.2Link to Ensembl Protein Viewer:ENSP00000394163.2Re-query CCDS DB by Nucleotide ID:ENST00000432074Re-query CCDS DB by Protein ID:ENSP00000394163
Original member Current member NCBI NM_001291963.2 NP_001278892.1 Accepted alive Link to Nucleotide Sequence:NM_001291963.2Link to Protein Sequence:NP_001278892.1Re-query CCDS DB by Nucleotide ID:NM_001291963Re-query CCDS DB by Protein ID:NP_001278892Link to BLAST:NP_001278892.1

Chromosomal Locations for CCDS 77997.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 10680707 10681169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 10748175 10748271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 10761014 10761068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGTCTTCGCCTCCCGAAGGGAAACTAGAGACTAAAGCTGGACACCCGCCCGCCGTGAAAGCTGGTGGAA
TGCGAATTGTGCAGAAACACCCACATACAGGAGACACCAAAGAAGAGAAAGACAAGGATGACCAGGAATG
GGAAAGCCCCAGGGTGACAAAGATTTCCCCCCGGCGGCTGCGCAGGTGGCTCACCAGAAGCCGCATGCCT
CCATGGACAAGCATCCTTCCCCAAGAACCCAGCACATCCAGCAGCCACGCAAGTGAGCCTGGAGTCCACC
AGCCTGCCCCATGGCCCCGGCTCTGCTGCACTTGGTATTTCCCTGACAGAGAGAACCAGCAGTTTCGCCC
AAATCCTACTCTGCTGGGAAATCTAAGGCAAAACCAAGTGCTCTGTCCTTTGCCTTACATTTCCATATTT
AAAACTAGAAACAGCTCCAGCCCAAACCTTGTTTATGGGGAGTCTGGTTGGATGTCATTTGAGGATCATT
GTGCCCCTAGAGGTGCCATTAGCAGAATTTGCCAAGATCCGAGAAAAATTTTAGCTTTAGTTCTATTTCA
GCAGTCACCTGACGTCCTTGTCTATGGTCTTAAAAACAAGAAGGCACACATTTGA

Translation (204 aa):
MSSPPEGKLETKAGHPPAVKAGGMRIVQKHPHTGDTKEEKDKDDQEWESPRVTKISPRRLRRWLTRSRMP
PWTSILPQEPSTSSSHASEPGVHQPAPWPRLCCTWYFPDRENQQFRPNPTLLGNLRQNQVLCPLPYISIF
KTRNSSSPNLVYGESGWMSFEDHCAPRGAISRICQDPRKILALVLFQQSPDVLVYGLKNKKAHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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