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Report for CCDS77456.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77456.1 Public Homo sapiens 2 RABL2A 24 110 108 CCDS HistoryNCBI Gene:11159Re-query CCDS DB by CCDS ID:77456.1Re-query CCDS DB by GeneID:11159See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77456.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376439.3 ENSP00000365622.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376439.3Link to Ensembl Protein Viewer:ENSP00000365622.3Re-query CCDS DB by Nucleotide ID:ENST00000376439Re-query CCDS DB by Protein ID:ENSP00000365622
Original member Current member EBI ENST00000409842.5 ENSP00000386460.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409842.5Link to Ensembl Protein Viewer:ENSP00000386460.1Re-query CCDS DB by Nucleotide ID:ENST00000409842Re-query CCDS DB by Protein ID:ENSP00000386460
Original member Current member NCBI NM_001306161.2 NP_001293090.1 Accepted alive Link to Nucleotide Sequence:NM_001306161.2Link to Protein Sequence:NP_001293090.1Re-query CCDS DB by Nucleotide ID:NM_001306161Re-query CCDS DB by Protein ID:NP_001293090Link to BLAST:NP_001293090.1
Original member Current member NCBI NM_001354421.2 NP_001341350.1 Accepted alive Link to Nucleotide Sequence:NM_001354421.2Link to Protein Sequence:NP_001341350.1Re-query CCDS DB by Nucleotide ID:NM_001354421Re-query CCDS DB by Protein ID:NP_001341350Link to BLAST:NP_001341350.1
Original member Current member NCBI NM_001354423.2 NP_001341352.1 Accepted alive Link to Nucleotide Sequence:NM_001354423.2Link to Protein Sequence:NP_001341352.1Re-query CCDS DB by Nucleotide ID:NM_001354423Re-query CCDS DB by Protein ID:NP_001341352Link to BLAST:NP_001341352.1

Chromosomal Locations for CCDS 77456.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 113628607 113628713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113632915 113632944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113634153 113634232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113641353 113641450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113641781 113641864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 113642031 113642129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (498 nt):
ATGGCAGAAGACAAAACCAAACCGAGTGAGTTGGACCAAGGGAAGTATGATGCTGATGACAACGTGAAGA
TCATCTGCCTGGGAGACAGCGCAGTGGGCAAATCCAAACTCATGGAGAGATTTCTCATGGATGGCTTTCA
GCCACAGCAGCTGTCCACGTACGCCCTGACCCTGTACAAGCACACAGCCACGGTAGATGGCAAGACCATC
CTTGTGGCAGACATAAACGTGACCCAAAAAAGCTTCAATTTTGCCAAGAAGTTCTCCCTGCCCCTGTATT
TCGTCTCGGCTGCTGATGGTACCAATGTTGTGAAGCTCTTCAATGATGCAATTCGATTAGCTGTGTCTTA
CAAACAGAACTCCCAGGACTTCATGGATGAGATTTTTCAGGAGCTCGAGAACTTCAGCTTGGAGCAGGAA
GAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGAGGAGGTGGCCTCTCCCC
ACAGCTGA

Translation (165 aa):
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTI
LVADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQE
EEDVPDQEQSSSIETPSEEVASPHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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