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Report for CCDS76431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76431.1 Public Homo sapiens 11 SLC25A45 24 110 108 CCDS HistoryNCBI Gene:283130Re-query CCDS DB by CCDS ID:76431.1Re-query CCDS DB by GeneID:283130See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76431.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000526432.5 ENSP00000435547.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526432.5Link to Ensembl Protein Viewer:ENSP00000435547.1Re-query CCDS DB by Nucleotide ID:ENST00000526432Re-query CCDS DB by Protein ID:ENSP00000435547
Original member Current member NCBI NM_001300820.2 NP_001287749.2 Accepted alive Link to Nucleotide Sequence:NM_001300820.2Link to Protein Sequence:NP_001287749.2Re-query CCDS DB by Nucleotide ID:NM_001300820Re-query CCDS DB by Protein ID:NP_001287749Link to BLAST:NP_001287749.2

Chromosomal Locations for CCDS 76431.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65376407 65376675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65376818 65377076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65379867 65379938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65380132 65380175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65381915 65381951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGCCGGTGGAGGAATTTGTGGCTGGCTGGATCTCTGGCGCTCTGGGCTTGGTCCTGGGACACCCGTTTG
ACACTGTAAAGGTGAGGCTGCAGACCCAGACCACCTACCGGGGCATCGTTGATTGCATGGTCAAGATTTA
CCGCCATGAGTCCGCCTACTGTCTGGCTCCTTTTGACCTCATCAAAGTCCGGCTACAAAACCAGACAGAG
CCAAGGGCCCAGCCAGGGAGCCCCCCACCCCGGTACCAGGGGCCCGTGCACTGTGCAGCCTCCATCTTCC
GGGAGGAGGGGCCCCGGGGGCTGTTCCGAGGAGCCTGGGCCCTGACGCTGAGGGACACCCCCACGGTGGG
GATCTACTTCATCACCTATGAAGGGCTCTGTCGCCAGTACACACCAGAAGGCCAGAATCCCAGCTCAGCC
ACGGTGCTGGTGGCAGGGGGCTTTGCAGGCATTGCTTCCTGGGTGGCAGCCACGCCCTTAGACATGATCA
AGTCCCGGATGCAGATGGATGGACTGAGACGCAGAGTGTACCAGGGGATGCTGGACTGCATGGTGAGCAG
CATCCGGCAGGAAGGACTGGGAGTCTTCTTCCGGGGGGTCACCATCAACAGTGCCCGCGCCTTTCCCGTC
AATGCTGTCACCTTCCTCAGCTACGAATATCTCCTCCGCTGGTGGGGATGA

Translation (226 aa):
MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQTTYRGIVDCMVKIYRHESAYCLAPFDLIKVRLQNQTE
PRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSA
TVLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPV
NAVTFLSYEYLLRWWG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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