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Report for CCDS75973.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75973.1 Public Homo sapiens X SLC35A2 24 110 108 CCDS HistoryNCBI Gene:7355Re-query CCDS DB by CCDS ID:75973.1Re-query CCDS DB by GeneID:7355See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75973.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616181.5 ENSP00000478617.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616181.5Link to Ensembl Protein Viewer:ENSP00000478617.1Re-query CCDS DB by Nucleotide ID:ENST00000616181Re-query CCDS DB by Protein ID:ENSP00000478617
Original member Current member NCBI NM_001282650.2 NP_001269579.1 Accepted alive Link to Nucleotide Sequence:NM_001282650.2Link to Protein Sequence:NP_001269579.1Re-query CCDS DB by Nucleotide ID:NM_001282650Re-query CCDS DB by Protein ID:NP_001269579Link to BLAST:NP_001269579.1

Chromosomal Locations for CCDS 75973.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48904727 48905482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48906392 48906543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48909814 48909996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48911507 48911636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGGCAGCGGTTGGGGCTGGTGGTTCCACCGCGGCGCCCGGGCCAGGGGCGGTTTCCGCGGGTGCATTGG
AGCCGGGGACCGCCAGTGCGGGTGAGACAGTCTGCCCGAGCAGTCGCATGGGAGGCGGAGCTCACAGGCG
CCTGAAGTACATATCCCTAGCTGTGCTGGTGGTCCAGAATGCCTCCCTCATCCTCAGCATCCGCTACGCC
CGCACGTTGCCAGGGGACCGCTTCTTTGCCACCACTGCTGTGGTCATGGCGGAAGTGCTCAAAGGTCTCA
CCTGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAACGTGAAGCACCTGGTTCTCTTCCTCCATGAGGC
TGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGTGCCCTCTCTCATCTACACCTTGCAGAATAAC
CTCCAGTATGTTGCCATCTCTAACCTACCAGCTGCCACTTTCCAGGTGACATACCAGCTGAAGATCCTGA
CCACAGCGCTGTTCTCCGTGCTCATGCTGAATCGCAGCCTTTCCCGGCTGCAGTGGGCCTCCCTGCTGCT
CCTCTTCACTGGCGTCGCCATTGTCCAGGCACAGCAAGCCGGTGGGGGAGGCCCACGGCCACTGGATCAG
AACCCTGGGGCAGGCCTGGCAGCCGTCGTGGCCTCCTGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTG
AGAAGATCCTCAAAGGCAGCTCAGGCTCCGTGTGGCTGCGCAACCTGCAACTGGGCCTCTTCGGCACAGC
ACTGGGCCTGGTGGGGCTCTGGTGGGCTGAGGGTACCGCCGTGGCCACCCGTGGTTTCTTTTTTGGGTAC
ACACCTGCTGTCTGGGGCGTGGTGCTCAACCAGGCCTTCGGCGGGCTACTGGTGGCTGTGGTTGTCAAGT
ACGCTGACAATATCCTCAAGGGCTTTGCCACCTCCCTGTCCATTGTGCTGTCCACTGTTGCCTCCATTCG
CCTCTTTGGCTTCCACGTGGACCCATTATTTGCCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACCTC
TACAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTGCCTCCGCCTCCGGGCCCTGCGTTC
ACCAGCAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCC
CTTTCTGCCAAAGTCAGTGCTGGTGAAGTGA

Translation (406 aa):
MAAVGAGGSTAAPGPGAVSAGALEPGTASAGETVCPSSRMGGGAHRRLKYISLAVLVVQNASLILSIRYA
RTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNN
LQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLLLFTGVAIVQAQQAGGGGPRPLDQ
NPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVWLRNLQLGLFGTALGLVGLWWAEGTAVATRGFFFGY
TPAVWGVVLNQAFGGLLVAVVVKYADNILKGFATSLSIVLSTVASIRLFGFHVDPLFALGAGLVIGAVYL
YSLPRGAAKAIASASASASGPCVHQQPPGQPPPPQLSSHRGDLITEPFLPKSVLVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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