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Report for CCDS75796.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75796.1 Public Homo sapiens 8 JRK 24 110 108 CCDS HistoryNCBI Gene:8629Re-query CCDS DB by CCDS ID:75796.1Re-query CCDS DB by GeneID:8629See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75796.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000612905.2 ENSP00000482410.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000612905.2Link to Ensembl Protein Viewer:ENSP00000482410.1Re-query CCDS DB by Nucleotide ID:ENST00000612905Re-query CCDS DB by Protein ID:ENSP00000482410
Original member Current member EBI ENST00000614134.1 ENSP00000485390.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614134.1Link to Ensembl Protein Viewer:ENSP00000485390.1Re-query CCDS DB by Nucleotide ID:ENST00000614134Re-query CCDS DB by Protein ID:ENSP00000485390
Original member Current member NCBI NM_003724.4 NP_003715.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003724.4Link to Protein Sequence:NP_003715.3Re-query CCDS DB by Nucleotide ID:NM_003724Re-query CCDS DB by Protein ID:NP_003715Link to BLAST:NP_003715.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003715.3 568 O75564-2 568 100% 0 0

Chromosomal Locations for CCDS 75796.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 142664352 142666058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1707 nt):
ATGGCCTCCAAGCCGGCTGCCGGGAAGAGCAGAGGGGAGAAGCGGAAGAGGGTGGTGCTGACACTGAAGG
AGAAGATTGACATCTGCACGCGCCTGGAGAAGGGCGAGAGCCGGAAGGCACTGATGCAGGAGTACAATGT
GGGCATGTCCACCCTCTACGACATCAGGGCCCACAAGGCGCAGCTGCTCCGGTTCTTCGCCAGCTCCGAC
TCCAACAAGGCGCTGGAGCAGCGGCGCACGCTGCACACGCCCAAGCTGGAGCACCTGGACCGCGTCCTGT
ACGAGTGGTTCCTGGGGAAGCGCTCCGAGGGCGTCCCCGTGTCAGGCCCCATGCTCATCGAGAAGGCCAA
GGACTTCTACGAGCAGATGCAGCTCACTGAGCCCTGCGTGTTCTCCGGAGGGTGGCTTTGGCGCTTTAAG
GCCAGACACGGCATTAAAAAGCTAGATGCATCCAGTGAAAAGCAGTCAGCCGACCACCAGGCCGCGGAGC
AGTTCTGTGCGTTTTTCAGGAGCTTGGCTGCTGAGCACGGGCTGTCCGCCGAGCAGGTTTACAACGCTGA
TGAGACCGGCCTTTTCTGGCGGTGCCTGCCAAATCCCACTCCGGAAGGCGGGGCTGTGCCTGGCCCCAAG
CAGGGCAAGGACCGGCTGACCGTGCTGATGTGTGCCAACGCCACGGGCTCCCACAGGCTCAAGCCCTTGG
CCATCGGGAAGTGCAGCGGTCCCAGGGCTTTCAAAGGCATCCAGCACCTGCCCGTCGCCTATAAGGCCCA
GGGGAACGCCTGGGTGGACAAGGAGATTTTTTCCGATTGGTTCCATCATATCTTTGTGCCCTCGGTGAGA
GAGCACTTCAGAACCATAGGTTTGCCGGAAGACAGCAAAGCCGTTCTCTTGCTGGACAGCTCCCGGGCTC
ACCCGCAGGAGGCCGAGCTGGTGTCCAGTAACGTTTTCACCATCTTCCTGCCTGCCAGCGTGGCCTCATT
GGTGCAGCCCATGGAGCAGGGCATTCGGAGAGATTTCATGAGGAACTTCATTAACCCTCCGGTCCCCCTG
CAGGGCCCCCACGCCCGCTACAACATGAACGATGCCATATTCAGCGTGGCCTGTGCCTGGAACGCAGTCC
CTAGCCACGTCTTCAGGCGGGCCTGGAGGAAGCTGTGGCCGTCGGTTGCGTTTGCCGAAGGCTCCTCCTC
TGAGGAGGAGTTGGAGGCAGAGTGCTTCCCAGTGAAGCCCCACAACAAGTCCTTTGCACACATCCTGGAG
CTTGTGAAGGAAGGCTCCTCCTGCCCGGGCCAGCTTCGCCAGCGCCAGGCCGCCAGCTGGGGGGTAGCGG
GAAGGGAGGCAGAAGGGGGACGGCCCCCTGCTGCCACGTCGCCAGCAGAGGTTGTGTGGAGTTCAGAAAA
GACTCCGAAAGCTGACCAGGACGGCAGAGGAGATCCTGGTGAGGGCGAGGAGGTGGCCTGGGAGCAGGCG
GCCGTGGCCTTTGACGCAGTCCTGCGCTTTGCGGAGCGGCAGCCATGCTTCAGTGCGCAGGAAGTGGGGC
AGCTGCGGGCGCTGCGTGCCGTGTTCCGGAGCCAGCAGCAGGTGAGGAGGCGGCGTGGTGCCCTCGGGGC
TGTGGTCAAGGTTGAAGCCCTCCAGGAGGGCCCTGGTGGCTGTGGGGCCACAGCTCAGTCTCCCTTGCCC
TGCTCATCCACAGCAGGTGACAACTGA

Translation (568 aa):
MASKPAAGKSRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSD
SNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVFSGGWLWRFK
ARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETGLFWRCLPNPTPEGGAVPGPK
QGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFKGIQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVR
EHFRTIGLPEDSKAVLLLDSSRAHPQEAELVSSNVFTIFLPASVASLVQPMEQGIRRDFMRNFINPPVPL
QGPHARYNMNDAIFSVACAWNAVPSHVFRRAWRKLWPSVAFAEGSSSEEELEAECFPVKPHNKSFAHILE
LVKEGSSCPGQLRQRQAASWGVAGREAEGGRPPAATSPAEVVWSSEKTPKADQDGRGDPGEGEEVAWEQA
AVAFDAVLRFAERQPCFSAQEVGQLRALRAVFRSQQQVRRRRGALGAVVKVEALQEGPGGCGATAQSPLP
CSSTAGDN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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