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Report for CCDS75290.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75290.1 Public Homo sapiens 5 PRR16 24 110 108 CCDS HistoryNCBI Gene:51334Re-query CCDS DB by CCDS ID:75290.1Re-query CCDS DB by GeneID:51334See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75290.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407149.7 ENSP00000385118.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000407149.7Link to Ensembl Protein Viewer:ENSP00000385118.2Re-query CCDS DB by Nucleotide ID:ENST00000407149Re-query CCDS DB by Protein ID:ENSP00000385118
Original member Current member NCBI NM_001300783.2 NP_001287712.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001300783.2Link to Protein Sequence:NP_001287712.1Re-query CCDS DB by Nucleotide ID:NM_001300783Re-query CCDS DB by Protein ID:NP_001287712Link to BLAST:NP_001287712.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287712.1 304 Q569H4-1 304 100% 0 0

Chromosomal Locations for CCDS 75290.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 120464487 120464645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 120685954 120686709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGTCAGCCAAGTCCAAGGGGAACCCCTCCTCGTCCTGTCCAGCCGAGGGACCGCCGGCAGCCTCCAAAA
CCAAGGTGAAGGAACAGATCAAGATCATCGTGGAGGATTTGGAATTAGTCCTGGGCGACCTGAAGGACGT
GGCCAAGGAACTTAAGGAGGTGGTTGACCAGATTGACACCCTGACCTCTGACCTACAGCTGGAGGATGAG
ATGACTGACAGCTCCAAAACGGACACGCTGAATAGTAGCTCAAGTGGCACAACAGCCTCCAGCCTAGAGA
AGATCAAAGTGCAGGCTAATGCACCGCTTATTAAACCCCCAGCACACCCGTCTGCTATCCTCACGGTCCT
GAGAAAGCCAAACCCTCCACCACCTCCTCCAAGGTTGACACCTGTGAAGTGTGAAGACCCCAAAAGGGTG
GTTCCAACTGCCAATCCTGTAAAAACCAATGGCACCCTTCTACGAAATGGAGGCTTACCAGGTGGACCTA
ACAAAATTCCAAATGGAGATATCTGCTGCATACCCAACAGTAACTTGGACAAGGCTCCAGTCCAGCTTCT
GATGCATAGACCTGAAAAAGACAGATGTCCCCAGGCAGGGCCTCGAGAACGAGTTCGGTTTAATGAAAAA
GTACAGTACCATGGCTATTGTCCTGACTGTGATACCCGGTATAACATAAAAAACAGGGAGGTCCACTTAC
ACAGTGAACCTGTCCACCCACCGGGAAAGATTCCTCACCAAGGCCCTCCCCTCCCTCCTACACCCCATCT
CCCTCCTTTCCCACTAGAAAATGGGGGAATGGGAATAAGCCACAGTAACAGCTTCCCCCCTATCAGACCT
GCAACTGTGCCTCCTCCCACTGCACCAAAACCACAGAAGACGATCTTGAGGAAGTCAACCACTACAACCG
TGTGA

Translation (304 aa):
MSAKSKGNPSSSCPAEGPPAASKTKVKEQIKIIVEDLELVLGDLKDVAKELKEVVDQIDTLTSDLQLEDE
MTDSSKTDTLNSSSSGTTASSLEKIKVQANAPLIKPPAHPSAILTVLRKPNPPPPPPRLTPVKCEDPKRV
VPTANPVKTNGTLLRNGGLPGGPNKIPNGDICCIPNSNLDKAPVQLLMHRPEKDRCPQAGPRERVRFNEK
VQYHGYCPDCDTRYNIKNREVHLHSEPVHPPGKIPHQGPPLPPTPHLPPFPLENGGMGISHSNSFPPIRP
ATVPPPTAPKPQKTILRKSTTTTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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