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Report for CCDS7519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7519.1 Public Homo sapiens 10 NPM3 24 110 108 CCDS HistoryNCBI Gene:10360Re-query CCDS DB by CCDS ID:7519.1Re-query CCDS DB by GeneID:10360See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7519.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370110.6 ENSP00000359128.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370110.6Link to Ensembl Protein Viewer:ENSP00000359128.5Re-query CCDS DB by Nucleotide ID:ENST00000370110Re-query CCDS DB by Protein ID:ENSP00000359128
Original member Current member NCBI NM_006993.3 NP_008924.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006993.3Link to Protein Sequence:NP_008924.1Re-query CCDS DB by Nucleotide ID:NM_006993Re-query CCDS DB by Protein ID:NP_008924Link to BLAST:NP_008924.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008924.1 178 O75607 178 100% 0 0

Chromosomal Locations for CCDS 7519.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 101781736 101781854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101782258 101782351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101782478 101782597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101782839 101782924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 101783273 101783390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (537 nt):
ATGGCCGCCGGTACTGCAGCTGCCTTAGCGTTTTTGAGTCAGGAGAGCCGAACGCGGGCCGGGGGTGTCG
GGGGCCTACGGGTCCCGGCCCCGGTCACTATGGACAGTTTTTTCTTCGGCTGTGAGCTCTCCGGCCACAC
CCGCTCCTTCACCTTTAAGGTAGAGGAAGAGGATGATGCGGAGCACGTGCTGGCACTAACCATGCTCTGC
CTCACCGAGGGAGCCAAAGACGAGTGTAATGTGGTAGAAGTTGTGGCCCGGAACCATGACCATCAGGAGA
TCGCAGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAACCCATGCTCAGTCTGGATGACTTCCAGCTCCA
ACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGGCCCTGTGCGGATCACTGGGCGGCACCAGATTGTT
ACGATGAGCAATGATGTTTCTGAGGAGGAGAGCGAGGAAGAGGAAGAGGACAGTGATGAGGAAGAAGTTG
AGCTGTGCCCCATCCTTCCTGCCAAAAAGCAGGGGGGCAGGCCCTAG

Translation (178 aa):
MAAGTAAALAFLSQESRTRAGGVGGLRVPAPVTMDSFFFGCELSGHTRSFTFKVEEEDDAEHVLALTMLC
LTEGAKDECNVVEVVARNHDHQEIAVPVANLKLSCQPMLSLDDFQLQPPVTFRLKSGSGPVRITGRHQIV
TMSNDVSEEESEEEEEDSDEEEVELCPILPAKKQGGRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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