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Report for CCDS7440.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7440.2 Public Homo sapiens 10 ACSM6 24 110 108 CCDS HistoryNCBI Gene:142827Re-query CCDS DB by CCDS ID:7440.2Re-query CCDS DB by GeneID:142827See the combined annotation on chromosome 10 in Sequence Viewer

Public Note for CCDS 7440.1
The coding region has been updated to represent an alternative splice pattern, resulting in an extended N-terminus and an alternative and longer C-terminus that is more supported by the available transcript and protein data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7440.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394005.4 ENSP00000377573.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394005.4Link to Ensembl Protein Viewer:ENSP00000377573.3Re-query CCDS DB by Nucleotide ID:ENST00000394005Re-query CCDS DB by Protein ID:ENSP00000377573
Original member Current member NCBI NM_207321.3 NP_997204.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207321.3Link to Protein Sequence:NP_997204.2Re-query CCDS DB by Nucleotide ID:NM_207321Re-query CCDS DB by Protein ID:NP_997204Link to BLAST:NP_997204.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997204.2 480 Q6P461-1 480 100% 0 0

Chromosomal Locations for CCDS 7440.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 95194486 95194677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95201985 95202195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95207208 95207415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95210650 95210793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95211878 95212034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95212858 95212940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95214852 95214975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95219891 95219971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95225290 95225391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95228644 95228784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1443 nt):
ATGCTAGGCCGATTTCAACCCTTCTCCTTGGTCCGGAGTTTCAGACTGGGATTTGAAGCCTGCTGCTATC
CAAACCAAAAATGTGCTACTCAGACCATCAGACCCCCTGACTCCAGGTGCCTAGTCCAAGCAGTTTCTCA
GAACTTTAATTTTGCAAAGGATGTGTTGGATCAGTGGTCCCAGCTGGAAAAGGACGGACTCAGAGGGCCT
TACCCCGCCCTCTGGAAGGTTAGTGCCAAAGGAGAAGAGGACAAATGGAGCTTTGAAAGGATGACTCAAC
TCTCCAAGAAGGCCGCCAGCATCCTCTCAGACACCTGTGCCCTTAGCCATGGAGACCGGCTGATGATAAT
CTTGCCCCCAACACCTGAAGCCTACTGGATCTGCCTGGCCTGTGTGCGCTTGGGAATCACCTTTGTGCCT
GGGAGCCCCCAGCTGACTGCCAAGAAAATTCGCTATCAATTACGCATGTCTAAGGCCCAGTGCATTGTGG
CTAATGAAGCTATGGCCCCAGTTGTAAACTCTGCCGTGTCCGACTGCCCCACCTTGAAAACCAAGCTCCT
GGTGTCAGATAAGAGCTATGATGGGTGGTTGGATTTCAAGAAGTTGATTCAAGTTGCCCCTCCAAAGCAG
ACCTACATGAGGACCAAAAGCCAAGATCCAATGGCCATATTCTTCACCAAGGGTACAACAGGAGCTCCCA
AAATGGTCGAGTATTCCCAGTATGGTTTGGGAATGGGATTCAGCCAGGCTTCCAGACGGTGGATGGATCT
CCAGCCAACAGATGTCTTGTGGAGTCTGGGTGATGCCTTTGGTGGATCTTTATCCCTGAGCGCTGTCTTG
GGAACTTGGTTCCAAGGAGCCTGTGTGTTTCTGTGTCACATGCCAACCTTCTGCCCTGAGACTGTTCTAA
ATGTCCTGTCCAGATTTCCCATCACCACTCTATCTGCAAATCCAGAGATGTACCAGGAACTGCTTCAGCA
CAAGTGTTTCACCAGCTACAGATTCAAGAGTCTGAAGCAGTGTGTGGCTGCAGGAGGACCCATCAGCCCT
GGGGTGATTGAGGACTGGAAACGCATCACTAAGTTGGACATCTATGAAGGCTATGGGCAGACGGAAACTG
GTCTACTCTGTGCCACTTCCAAAACAATAAAATTGAAGCCAAGCTCTCTGGGGAAGCCATTGCCACCTTA
TATTGTCCAGATTGTGGATGAAAACTCAAATCTCCTGCCTCCAGGGGAAGAAGGAAATATTGCAATCCGC
ATAAAACTAAACCAACCTGCTTCTCTGTACTGTCCACACATGGTGAGCTGGGAGGAATATGCTTCAGCAA
GAGGCCACATGCTTTACCTCACAGGTGACAGAGGGATCATGGATGAAGACGGCTACTTCTGGTGGTCTGG
TAGAGTTGATGATGTTGCCAATGCATTGGGTCAGAGATTGTGA

Translation (480 aa):
MLGRFQPFSLVRSFRLGFEACCYPNQKCATQTIRPPDSRCLVQAVSQNFNFAKDVLDQWSQLEKDGLRGP
YPALWKVSAKGEEDKWSFERMTQLSKKAASILSDTCALSHGDRLMIILPPTPEAYWICLACVRLGITFVP
GSPQLTAKKIRYQLRMSKAQCIVANEAMAPVVNSAVSDCPTLKTKLLVSDKSYDGWLDFKKLIQVAPPKQ
TYMRTKSQDPMAIFFTKGTTGAPKMVEYSQYGLGMGFSQASRRWMDLQPTDVLWSLGDAFGGSLSLSAVL
GTWFQGACVFLCHMPTFCPETVLNVLSRFPITTLSANPEMYQELLQHKCFTSYRFKSLKQCVAAGGPISP
GVIEDWKRITKLDIYEGYGQTETGLLCATSKTIKLKPSSLGKPLPPYIVQIVDENSNLLPPGEEGNIAIR
IKLNQPASLYCPHMVSWEEYASARGHMLYLTGDRGIMDEDGYFWWSGRVDDVANALGQRL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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