NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS74102.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74102.1 Public Homo sapiens 17 PPP1R9B 24 110 108 CCDS HistoryNCBI Gene:84687Re-query CCDS DB by CCDS ID:74102.1Re-query CCDS DB by GeneID:84687See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74102.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000612501.2 ENSP00000478767.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000612501.2Link to Ensembl Protein Viewer:ENSP00000478767.1Re-query CCDS DB by Nucleotide ID:ENST00000612501Re-query CCDS DB by Protein ID:ENSP00000478767
Original member Current member NCBI NM_032595.5 NP_115984.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032595.5Link to Protein Sequence:NP_115984.3Re-query CCDS DB by Nucleotide ID:NM_032595Re-query CCDS DB by Protein ID:NP_115984Link to BLAST:NP_115984.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115984.3 817 Q96SB3 817 100% 0 0

Chromosomal Locations for CCDS 74102.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 50135331 50135384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50135553 50135649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50135968 50136197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50139263 50139316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50139429 50139581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50140093 50140228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50141269 50141373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50143598 50143718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50145113 50145245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50149143 50150513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2454 nt):
ATGATGAAGACGGAGCCACGGGGGCCCGGGGGTCCCCTCCGGAGCGCCTCCCCGCACCGCAGCGCCTACG
AGGCGGGCATCCAGGCGCTGAAGCCGCCCGACGCGCCCGGGCCCGACGAGGCACCCAAGGGGGCCCACCA
CAAGAAATATGGCTCCAACGTCCACCGCATCAAAAGTATGTTCCTGCAGATGGGCACGACGGCGGGGCCC
TCGGGCGAGGCGGGCGGCGGCGCGGGCCTGGCCGAGGCCCCACGGGCGTCCGAGCGCGGCGTGCGCCTGT
CGCTGCCGCGGGCCAGCAGCCTGAACGAGAACGTGGACCACAGCGCCCTGCTGAAGCTGGGCACCAGCGT
GTCGGAGCGCGTGAGCCGCTTCGACTCCAAGCCCGCGCCCTCCGCGCAGCCTGCGCCGCCGCCGCACCCG
CCGTCCCGGCTGCAGGAGACGCGGAAGCTGTTCGAACGGAGCGCCCCAGCGGCCGCAGGCGGCGACAAGG
AGGCCGCGGCGCGGCGGCTGCTGAGGCAGGAGCGCGCCGGCCTGCAGGACCGGAAGCTGGACGTCGTGGT
GCGCTTCAACGGCAGCACCGAGGCGCTGGACAAGCTGGACGCTGACGCCGTGTCCCCCACGGTCAGCCAG
CTCAGCGCCGTCTTCGAGAAGGCCGACTCGAGGACCGGCCTCCACCGCGGGCCCGGGCTCCCCAGGGCCG
CAGGGGTTCCCCAGGTCAACTCGAAGCTGGTCAGCAAGCGGTCCCGGGTGTTCCAGCCCCCGCCGCCGCC
GCCGCCCGCCCCGTCGGGGGATGCCCCGGCCGAGAAAGAGCGATGCCCCGCAGGGCAGCAGCCCCCGCAG
CACCGAGTGGCCCCTGCCCGGCCGCCCCCCAAGCCCCGGGAGGTGCGCAAGATTAAGCCGGTGGAGGTGG
AGGAGAGCGGGGAGTCGGAGGCCGAGTCGGCGCCCGGGGAGGTGATCCAGGCCGAGGTTACGGTCCACGC
GGCCCTGGAGAATGGCAGCACCGTGGCAACTGCAGCCAGCCCCGCGCCCGAGGAGCCAAAGGCCCAAGCG
GCCCCGGAGAAGGAGGCGGCGGCGGTAGCGCCGCCAGAGAGGGGGGTGGGCAATGGCCGGGCCCCGGACG
TGGCCCCTGAGGAGGTAGATGAATCCAAGAAGGAGGACTTCTCGGAGGCGGACTTGGTGGACGTGAGCGC
CTACAGTGGGCTCGGGGAGGACTCTGCGGGCAGTGCCCTGGAGGAGGACGACGAAGACGACGAGGAGGAT
GGGGAGCCCCCCTACGAGCCCGAGTCGGGGTGCGTGGAGATCCCGGGGCTGTCGGAGGAGGAGGACCCAG
CCCCGAGCCGGAAGATCCATTTCAGCACGGCGCCCATCCAAGTGTTCAGCACTTACTCCAACGAGGATTA
CGATCGTCGCAACGAGGATGTGGATCCCATGGCAGCCTCTGCTGAGTACGAGCTGGAGAAGCGTGTGGAG
AGGTTGGAGCTGTTCCCTGTGGAGCTGGAGAAGGACTCCGAGGGCCTGGGCATCAGCATCATCGGCATGG
GCGCCGGGGCAGACATGGGCCTGGAGAAGCTGGGTATCTTCGTCAAGACCGTGACGGAGGGTGGTGCGGC
CCATCGGGATGGCAGGATCCAGGTGAATGATCTCCTGGTGGAGGTGGATGGAACAAGTCTGGTGGGAGTG
ACCCAGAGCTTCGCGGCGTCTGTGCTCCGGAACACCAAGGGCCGAGTGCGGTTTATGATTGGCCGGGAGC
GGCCGGGAGAGCAGAGCGAAGTGGCCCAGCTAATTCAGCAGACTTTGGAACAGGAGCGATGGCAGCGGGA
GATGATGGAGCAGAGATACGCCCAGTATGGGGAGGATGACGAGGAGACGGGAGAGTATGCCACTGACGAG
GATGAGGAGCTGAGCCCCACGTTCCCGGGTGGTGAGATGGCCATCGAGGTGTTTGAGCTAGCGGAGAACG
AGGATGCACTGTCCCCTGTGGACATGGAGCCCGAGAAGCTGGTGCACAAGTTCAAGGAGCTCCAGATCAA
GCATGCGGTCACTGAGGCAGAGATCCAGCAGCTGAAAAGAAAGCTGCAGAGCCTGGAGCAGGAGAAGGGG
CGCTGGCGGGTGGAGAAGGCGCAGTTGGAGCAGAGTGTGGAGGAGAACAAGGAGCGCATGGAGAAACTGG
AAGGCTACTGGGGTGAGGCCCAGAGCCTGTGCCAGGCTGTGGACGAGCACCTGCGGGAGACTCAGGCGCA
GTACCAGGCCCTGGAGCGCAAGTACAGCAAGGCCAAGCGCCTCATCAAGGACTACCAGCAGAAGGAGATC
GAGTTCCTGAAAAAGGAGACTGCACAGCGTCGGGTTCTGGAGGAGTCGGAGCTGGCCAGAAAGGAGGAGA
TGGACAAGCTCCTGGACAAGATCTCAGAACTGGAAGGAAACTTGCAAACACTGAGGAATTCCAATTCTAC
TTAA

Translation (817 aa):
MMKTEPRGPGGPLRSASPHRSAYEAGIQALKPPDAPGPDEAPKGAHHKKYGSNVHRIKSMFLQMGTTAGP
SGEAGGGAGLAEAPRASERGVRLSLPRASSLNENVDHSALLKLGTSVSERVSRFDSKPAPSAQPAPPPHP
PSRLQETRKLFERSAPAAAGGDKEAAARRLLRQERAGLQDRKLDVVVRFNGSTEALDKLDADAVSPTVSQ
LSAVFEKADSRTGLHRGPGLPRAAGVPQVNSKLVSKRSRVFQPPPPPPPAPSGDAPAEKERCPAGQQPPQ
HRVAPARPPPKPREVRKIKPVEVEESGESEAESAPGEVIQAEVTVHAALENGSTVATAASPAPEEPKAQA
APEKEAAAVAPPERGVGNGRAPDVAPEEVDESKKEDFSEADLVDVSAYSGLGEDSAGSALEEDDEDDEED
GEPPYEPESGCVEIPGLSEEEDPAPSRKIHFSTAPIQVFSTYSNEDYDRRNEDVDPMAASAEYELEKRVE
RLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGV
TQSFAASVLRNTKGRVRFMIGRERPGEQSEVAQLIQQTLEQERWQREMMEQRYAQYGEDDEETGEYATDE
DEELSPTFPGGEMAIEVFELAENEDALSPVDMEPEKLVHKFKELQIKHAVTEAEIQQLKRKLQSLEQEKG
RWRVEKAQLEQSVEENKERMEKLEGYWGEAQSLCQAVDEHLRETQAQYQALERKYSKAKRLIKDYQQKEI
EFLKKETAQRRVLEESELARKEEMDKLLDKISELEGNLQTLRNSNST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH