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Report for CCDS72902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72902.1 Public Homo sapiens 1 MTMR11 24 110 108 CCDS HistoryNCBI Gene:10903Re-query CCDS DB by CCDS ID:72902.1Re-query CCDS DB by GeneID:10903See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72902.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000439741.4 ENSP00000391668.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000439741.4Link to Ensembl Protein Viewer:ENSP00000391668.2Re-query CCDS DB by Nucleotide ID:ENST00000439741Re-query CCDS DB by Protein ID:ENSP00000391668
Original member Current member NCBI NM_001145862.2 NP_001139334.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145862.2Link to Protein Sequence:NP_001139334.1Re-query CCDS DB by Nucleotide ID:NM_001145862Re-query CCDS DB by Protein ID:NP_001139334Link to BLAST:NP_001139334.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139334.1 709 A4FU01-1 709 100% 0 0

Chromosomal Locations for CCDS 72902.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 149929129 149929317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149929623 149929916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149930365 149930547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149930792 149930965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149931260 149931426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149931944 149932014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149932264 149932330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149933406 149933530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149933610 149933698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149933855 149933942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149934191 149934326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149934448 149934526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149934986 149935128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149935299 149935359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149935584 149935705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149936154 149936229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149936582 149936647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2130 nt):
ATGTGGTGGGGGGGCCGGGGCCAGAGTTTCAACATTGCCCCCCAGAAGGAGGAGCCAGAGATGGGGTCTG
TCCAGGAAAATAGGATGCCGGAGCCCAGGAGTCGTCAGCCTAGCAGTTGCCTGGCCTCCAGATGCCTCCC
AGGGGAGCAGATCCTAGCATGGGCCCCAGGGGTGAGGAAGGGCCTGGAACCAGAATTGTCTGGAACCCTG
ATCTGTACCAACTTTAGGGTCACCTTCCAGCCCTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAACA
GTGAATACGATTTTGCCCTGGTCAACATTGGACGATTAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCT
CCTCCGTCCAGGGTCCCTGCATAAATTTATCCCTGAGGAGATTCTGATTCATGGCCGAGACTTCCGGCTG
CTCAGAGTTGGTTTTGAGGCTGGAGGCCTAGAGCCTCAGGCTTTTCAGGTGACCATGGCCATTGTCCAAG
CCAGAGCTCAGAGCAATCAAGCCCAACAGTATTCGGGGATAACCCTGAGCAAGGCTGGCCAGGGTTCTGG
CTCCAGAAAACCACCAATTCCTCTCATGGAGACAGCGGAAGACTGGGAGACTGAGCGGAAGAAGCAGGCA
GCCAGAGGCTGGAGGGTCAGCACGGTCAACGAGAGGTTCGACGTAGCCACCAGCCTCCCCCGTTACTTCT
GGGTCCCTAACCGAATTCTGGACAGTGAGGTCAGGAGAGCATTTGGCCACTTTCATCAGGGCCGTGGACC
GCGCTTGTCCTGGCATCACCCTGGGGGCAGTGATCTTCTCCGCTGTGGAGGCTTCTATACAGCCAGTGAC
CCTAACAAGGAGGATATCAGAGCAGTGGAGTTGATGCTCCAGGCTGGGCATTCAGATGTTGTCCTGGTAG
ACACTATGGATGAGCTGCCCAGCCTTGCAGATGTCCAACTTGCCCACCTGAGGCTGAGGGCCCTCTGCCT
GCCTGATTCATCTGTAGCTGAGGATAAATGGCTTTCAGCCCTGGAAGGAACACGATGGCTGGACTATGTC
AGGGCTTGTCTTCGAAAGGCCAGTGACATTTCAGTATTAGTGACATCCAGGGTTCGTTCTGTAATACTTC
AAGAGCGCGGTGATCGTGATCTCAATGGCCTCCTCTCTTCACTCGTCCAGCTGCTTTCAGCCCCCGAAGC
CCGAACACTGTTTGGCTTCCAATCACTAGTACAGCGAGAGTGGGTGGCAGCTGGACATCCCTTCCTGACT
CGGCTTGGGGGAACTGGGGCCAGTGAAGAGGCTCCGGTGTTTCTCCTCTTCCTTGATTGTGTCTGGCAGC
TCCTCCAGCAGTTTCCAGCTGATTTTGAATTCTCTGAGTTTTTCCTTCTTGCTCTTCATGACAGTGTCAG
GGTTCCTGACACCCTTACCTTCCTGAGAAATACCCCCTGGGAGCGCGGAAAGCAGAGCGGACAGTTAAAC
TCCTATACACAAGTCTACACCCCAGGATACTCCCAGCCTCCAGCTGGGAACTCTTTTAACCTGCAGCTGT
CTGTCTGGGACTGGGATTTACGTTATAGCAATGCACAGATACTACAATTCCAGAATCCTGGCTATGACCC
AGAACACTGTCCAGATTCCTGGCTCCCTAGACCACAGCCAAGCTTCATGGTTCCTGGACCCCCCAGTTCT
GTGTGGCTCTTCTCTAGAGGAGCATTGACCCCCCTGAATCAGCTCTGTCCTTGGCGGGACAGTCCTTCCC
TGCTGGCAGTCTCTTCTCGTTGGCTCCCTCGACCTGCTATCTCCTCTGAAAGCCTGGCTGACCAGGAATG
GGGTCTCCCCTCACATTGGGGAGCTTGCCCTTTACCTCCAGGGCTGCTGCTGCCTGGGTATCTGGGACCC
CAGATCAGGCTCTGGAGACGCTGCTACCTGAGGGGAAGGCCTGAGGTCCAGATGGGCCTCTCAGCTCCCA
CAATCTCTGGCCTCCAGGATGAGCTATCCCATCTTCAGGAGTTATTACGGAAATGGACACCAAGAATATC
TCCTGAGGATCACTCCAAGAAAAGAGATCCACATACCATTCTCAATCCCACTGAAATTGCTGGCATTCTC
AAAGGCAGGGCAGAGGGGGATCTGGGGTAG

Translation (709 aa):
MWWGGRGQSFNIAPQKEEPEMGSVQENRMPEPRSRQPSSCLASRCLPGEQILAWAPGVRKGLEPELSGTL
ICTNFRVTFQPCGWQWNQDTPLNSEYDFALVNIGRLEAVSGLSRVQLLRPGSLHKFIPEEILIHGRDFRL
LRVGFEAGGLEPQAFQVTMAIVQARAQSNQAQQYSGITLSKAGQGSGSRKPPIPLMETAEDWETERKKQA
ARGWRVSTVNERFDVATSLPRYFWVPNRILDSEVRRAFGHFHQGRGPRLSWHHPGGSDLLRCGGFYTASD
PNKEDIRAVELMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVAEDKWLSALEGTRWLDYV
RACLRKASDISVLVTSRVRSVILQERGDRDLNGLLSSLVQLLSAPEARTLFGFQSLVQREWVAAGHPFLT
RLGGTGASEEAPVFLLFLDCVWQLLQQFPADFEFSEFFLLALHDSVRVPDTLTFLRNTPWERGKQSGQLN
SYTQVYTPGYSQPPAGNSFNLQLSVWDWDLRYSNAQILQFQNPGYDPEHCPDSWLPRPQPSFMVPGPPSS
VWLFSRGALTPLNQLCPWRDSPSLLAVSSRWLPRPAISSESLADQEWGLPSHWGACPLPPGLLLPGYLGP
QIRLWRRCYLRGRPEVQMGLSAPTISGLQDELSHLQELLRKWTPRISPEDHSKKRDPHTILNPTEIAGIL
KGRAEGDLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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