NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS72901.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72901.1 Public Homo sapiens 1 MTMR11 24 110 108 CCDS HistoryNCBI Gene:10903Re-query CCDS DB by CCDS ID:72901.1Re-query CCDS DB by GeneID:10903See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72901.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369140.7 ENSP00000358136.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369140.7Link to Ensembl Protein Viewer:ENSP00000358136.3Re-query CCDS DB by Nucleotide ID:ENST00000369140Re-query CCDS DB by Protein ID:ENSP00000358136
Original member Current member NCBI NM_181873.3 NP_870988.2 Accepted alive Link to Nucleotide Sequence:NM_181873.3Link to Protein Sequence:NP_870988.2Re-query CCDS DB by Nucleotide ID:NM_181873Re-query CCDS DB by Protein ID:NP_870988Link to BLAST:NP_870988.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_870988.2 640 A4FU01-4 640 100% 0 0

Chromosomal Locations for CCDS 72901.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 149928867 149928901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149929155 149929317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149929623 149929916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149930365 149930547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149930792 149930965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149931260 149931426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149931944 149932014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149932264 149932330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149933406 149933530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149933610 149933698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149933855 149933942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149934191 149934326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149934448 149934526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149934986 149935128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149935299 149935359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149935584 149935620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 149936154 149936164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1923 nt):
ATGCCTCCCAGGGTCACCTTCCAGCCCTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAACAGTGAAT
ACGATTTTGCCCTGGTCAACATTGGACGATTAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCTCCTCCG
TCCAGGGTCCCTGCATAAATTTATCCCTGAGGAGATTCTGATTCATGGCCGAGACTTCCGGCTGCTCAGA
GTTGGTTTTGAGGCTGGAGGCCTAGAGCCTCAGGCTTTTCAGGTGACCATGGCCATTGTCCAAGCCAGAG
CTCAGAGCAATCAAGCCCAACAGTATTCGGGGATAACCCTGAGCAAGGCTGGCCAGGGTTCTGGCTCCAG
AAAACCACCAATTCCTCTCATGGAGACAGCGGAAGACTGGGAGACTGAGCGGAAGAAGCAGGCAGCCAGA
GGCTGGAGGGTCAGCACGGTCAACGAGAGGTTCGACGTAGCCACCAGCCTCCCCCGTTACTTCTGGGTCC
CTAACCGAATTCTGGACAGTGAGGTCAGGAGAGCATTTGGCCACTTTCATCAGGGCCGTGGACCGCGCTT
GTCCTGGCATCACCCTGGGGGCAGTGATCTTCTCCGCTGTGGAGGCTTCTATACAGCCAGTGACCCTAAC
AAGGAGGATATCAGAGCAGTGGAGTTGATGCTCCAGGCTGGGCATTCAGATGTTGTCCTGGTAGACACTA
TGGATGAGCTGCCCAGCCTTGCAGATGTCCAACTTGCCCACCTGAGGCTGAGGGCCCTCTGCCTGCCTGA
TTCATCTGTAGCTGAGGATAAATGGCTTTCAGCCCTGGAAGGAACACGATGGCTGGACTATGTCAGGGCT
TGTCTTCGAAAGGCCAGTGACATTTCAGTATTAGTGACATCCAGGGTTCGTTCTGTAATACTTCAAGAGC
GCGGTGATCGTGATCTCAATGGCCTCCTCTCTTCACTCGTCCAGCTGCTTTCAGCCCCCGAAGCCCGAAC
ACTGTTTGGCTTCCAATCACTAGTACAGCGAGAGTGGGTGGCAGCTGGACATCCCTTCCTGACTCGGCTT
GGGGGAACTGGGGCCAGTGAAGAGGCTCCGGTGTTTCTCCTCTTCCTTGATTGTGTCTGGCAGCTCCTCC
AGCAGTTTCCAGCTGATTTTGAATTCTCTGAGTTTTTCCTTCTTGCTCTTCATGACAGTGTCAGGGTTCC
TGACACCCTTACCTTCCTGAGAAATACCCCCTGGGAGCGCGGAAAGCAGAGCGGACAGTTAAACTCCTAT
ACACAAGTCTACACCCCAGGATACTCCCAGCCTCCAGCTGGGAACTCTTTTAACCTGCAGCTGTCTGTCT
GGGACTGGGATTTACGTTATAGCAATGCACAGATACTACAATTCCAGAATCCTGGCTATGACCCAGAACA
CTGTCCAGATTCCTGGCTCCCTAGACCACAGCCAAGCTTCATGGTTCCTGGACCCCCCAGTTCTGTGTGG
CTCTTCTCTAGAGGAGCATTGACCCCCCTGAATCAGCTCTGTCCTTGGCGGGACAGTCCTTCCCTGCTGG
CAGTCTCTTCTCGTTGGCTCCCTCGACCTGCTATCTCCTCTGAAAGCCTGGCTGACCAGGAATGGGGTCT
CCCCTCACATTGGGGAGCTTGCCCTTTACCTCCAGGGCTGCTGCTGCCTGGGTATCTGGGACCCCAGATC
AGGCTCTGGAGACGCTGCTACCTGAGGGGAAGGCCTGAGGTCCAGATGGGCCTCTCAGCTCCCACAATCT
CTGGCCTCCAGGATGAGCTATCCCATCTTCAGGAGTTATTACGGAAATGGACACCAAGAATATCTCCTGA
GGATCACTCCAAGAAAAGAGATCCACATACCATTCTCAATCCCACTGAAATTGCTGGCATTCTCAAAGGC
CAATCCCATCCCTTCTGGATAACCAGATGTTAA

Translation (640 aa):
MPPRVTFQPCGWQWNQDTPLNSEYDFALVNIGRLEAVSGLSRVQLLRPGSLHKFIPEEILIHGRDFRLLR
VGFEAGGLEPQAFQVTMAIVQARAQSNQAQQYSGITLSKAGQGSGSRKPPIPLMETAEDWETERKKQAAR
GWRVSTVNERFDVATSLPRYFWVPNRILDSEVRRAFGHFHQGRGPRLSWHHPGGSDLLRCGGFYTASDPN
KEDIRAVELMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVAEDKWLSALEGTRWLDYVRA
CLRKASDISVLVTSRVRSVILQERGDRDLNGLLSSLVQLLSAPEARTLFGFQSLVQREWVAAGHPFLTRL
GGTGASEEAPVFLLFLDCVWQLLQQFPADFEFSEFFLLALHDSVRVPDTLTFLRNTPWERGKQSGQLNSY
TQVYTPGYSQPPAGNSFNLQLSVWDWDLRYSNAQILQFQNPGYDPEHCPDSWLPRPQPSFMVPGPPSSVW
LFSRGALTPLNQLCPWRDSPSLLAVSSRWLPRPAISSESLADQEWGLPSHWGACPLPPGLLLPGYLGPQI
RLWRRCYLRGRPEVQMGLSAPTISGLQDELSHLQELLRKWTPRISPEDHSKKRDPHTILNPTEIAGILKG
QSHPFWITRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH