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Report for CCDS7266.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7266.2 Public Homo sapiens 10 ADO 24 110 108 CCDS HistoryNCBI Gene:84890Re-query CCDS DB by CCDS ID:7266.2Re-query CCDS DB by GeneID:84890See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7266.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373783.3 ENSP00000362888.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373783.3Link to Ensembl Protein Viewer:ENSP00000362888.1Re-query CCDS DB by Nucleotide ID:ENST00000373783Re-query CCDS DB by Protein ID:ENSP00000362888
Original member Current member NCBI NM_032804.6 NP_116193.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032804.6Link to Protein Sequence:NP_116193.2Re-query CCDS DB by Nucleotide ID:NM_032804Re-query CCDS DB by Protein ID:NP_116193Link to BLAST:NP_116193.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116193.2 270 Q96SZ5 270 100% 0 0

Chromosomal Locations for CCDS 7266.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 62805060 62805872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (813 nt):
ATGCCCCGAGACAACATGGCCTCCTTGATCCAACGGATCGCCCGCCAGGCTTGCCTCACCTTCCGGGGCA
GCGGGGGCGGCCGCGGCGCTTCCGATCGCGACGCGGCTTCTGGCCCGGAGGCGCCGATGCAGCCGGGCTT
CCCCGAGAACCTGAGCAAGCTGAAGAGCCTCCTGACCCAGCTCCGCGCCGAGGACTTGAACATCGCCCCG
CGCAAGGCCACACTGCAGCCGCTGCCGCCCAACCTGCCGCCAGTCACCTACATGCACATCTACGAGACGG
ACGGCTTCAGCCTGGGCGTGTTCCTGCTCAAGAGCGGCACGTCCATCCCGCTGCACGACCACCCGGGCAT
GCACGGCATGCTCAAGGTGCTGTACGGCACCGTGCGCATCAGCTGCATGGACAAGCTAGACGCGGGCGGC
GGGCAACGGCCGCGGGCCTTGCCGCCCGAGCAGCAGTTCGAGCCGCCGCTGCAGCCCCGGGAGCGAGAAG
CCGTGCGGCCGGGCGTGCTGCGTTCGCGGGCCGAGTACACCGAGGCCAGCGGCCCCTGCATCCTCACACC
GCACCGGGACAACCTGCACCAGATCGACGCCGTGGAAGGGCCTGCCGCCTTCCTGGACATCCTGGCCCCG
CCCTACGACCCGGACGATGGCCGGGACTGCCACTATTACCGGGTGCTGGAGCCGGTCAGGCCCAAGGAGG
CCTCCAGCTCGGCCTGTGACCTGCCTCGAGAGGTGTGGCTCCTGGAGACCCCACAGGCCGATGACTTCTG
GTGCGAGGGAGAACCCTATCCAGGTCCCAAGGTCTTCCCTTGA

Translation (270 aa):
MPRDNMASLIQRIARQACLTFRGSGGGRGASDRDAASGPEAPMQPGFPENLSKLKSLLTQLRAEDLNIAP
RKATLQPLPPNLPPVTYMHIYETDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLDAGG
GQRPRALPPEQQFEPPLQPREREAVRPGVLRSRAEYTEASGPCILTPHRDNLHQIDAVEGPAAFLDILAP
PYDPDDGRDCHYYRVLEPVRPKEASSSACDLPREVWLLETPQADDFWCEGEPYPGPKVFP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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