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Report for CCDS7163.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7163.1 Public Homo sapiens 10 SVIL 24 110 108 CCDS HistoryNCBI Gene:6840Re-query CCDS DB by CCDS ID:7163.1Re-query CCDS DB by GeneID:6840See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7163.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375400.7 ENSP00000364549.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375400.7Link to Ensembl Protein Viewer:ENSP00000364549.3Re-query CCDS DB by Nucleotide ID:ENST00000375400Re-query CCDS DB by Protein ID:ENSP00000364549
Original member Current member NCBI NM_003174.3 NP_003165.2 Accepted alive Link to Nucleotide Sequence:NM_003174.3Link to Protein Sequence:NP_003165.2Re-query CCDS DB by Nucleotide ID:NM_003174Re-query CCDS DB by Protein ID:NP_003165Link to BLAST:NP_003165.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003165.2 1788 O95425-2 1788 100% 0 0

Chromosomal Locations for CCDS 7163.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 29458247 29458333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29458434 29458589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29462277 29462401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29463492 29463635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29465595 29465750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29467742 29467875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29470276 29470483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29471138 29471243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29473838 29473989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29480537 29480813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29481584 29481728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29484656 29484831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29486085 29486230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29486410 29486557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29487163 29487299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29488601 29488756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29490847 29491019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29493214 29493391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29494914 29495000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29495092 29495181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29499116 29499263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29512735 29512861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29522410 29522635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29523451 29524027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29524472 29524715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29529705 29529844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29530607 29530668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29531254 29531288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29550597 29551263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29554783 29554934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 29555051 29555058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5367 nt):
ATGAAAAGAAAAGAAAGAATTGCCAGGCGCCTGGAAGGGATTGAAAATGACACTCAGCCCATCCTCTTGC
AGAGCTGCACAGGATTGGTGACTCACCGCCTGCTGGAGGAAGACACCCCTCGATACATGAGAGCCAGCGA
CCCTGCCAGCCCCCACATCGGCCGATCAAATGAAGAGGAGGAAACTTCTGATTCTTCTCTAGAAAAGCAA
ACTCGATCCAAATACTGCACAGAAACCTCCGGTGTCCACGGTGACTCACCCTATGGTTCGGGTACCATGG
ACACCCACAGTCTGGAGTCCAAAGCCGAAAGAATTGCAAGGTACAAAGCAGAAAGAAGGCGACAGCTGGC
AGAGAAGTATGGGCTGACTCTGGATCCCGAGGCCGACTCCGAGTATTTATCCCGCTATACCAAGTCCAGG
AAGGAGCCTGATGCTGTCGAGAAGCGGGGAGGAAAAAGTGACAAACAGGAAGAGTCAAGCAGAGATGCTA
GTTCTCTGTACCCCGGGACCGAGACGATGGGGCTCAGGACCTGTGCCGGTGAATCCAAGGACTATGCCCT
CCATGTGGGTGACGGCTCTTCCGACCCGGAGGTGCTGCTGAACATAGAAAACCAAAGACGAGGTCAAGAG
CTGAGTGCCACCCGGCAGGCCCATGACCTGTCCCCAGCAGCCGAGAGTTCCTCGACCTTCTCTTTCTCTG
GGCGAGACTCCTCCTTCACTGAAGTGCCACGGTCCCCCAAGCACGCCCACAGCTCCTCCCTGCAGCAGGC
AGCCTCCCGGAGCCCCTCCTTTGGTGACCCACAGCTATCCCCTGAGGCCCGACCCAGGTGCACTTCACAT
TCAGAAACGCCAACTGTCGATGATGAAGAAAAGGTGGATGAACGAGCCAAGCTGAGCGTCGCCGCCAAGA
GGTTGCTTTTCAGGGAGATGGAAAAATCTTTTGATGAACAAAATGTTCCAAAGCGACGCTCAAGAAACAC
AGCTGTGGAGCAGAGGCTACGCCGTCTGCAGGACAGGTCCCTCACCCAGCCCATCACCACTGAAGAGGTG
GTCATCGCAGCCACATTGCAGGCCTCTGCTCACCAAAAGGCCTTAGCCAAGGACCAGACAAATGAGGGCA
AAGAGCTTGCTGAGCAAGGAGAACCTGATTCCTCCACTCTAAGCTTGGCCGAAAAGTTGGCCTTGTTTAA
CAAATTGTCCCAGCCAGTCTCAAAAGCGATTTCTACCCGGAACAGAATAGACACGAGACAGAGGAGAATG
AACGCTCGCTATCAAACTCAGCCAGTCACACTGGGAGAGGTGGAGCAGGTGCAGAGTGGAAAGCTCATTC
CTTTCTCACCTGCCGTGAACACATCAGTGTCTACCGTAGCATCCACGGTTGCTCCAATGTATGCCGGAGA
TCTTCGCACAAAGCCACCTCTTGACCACAATGCAAGTGCCACTGACTATAAGTTTTCTTCTTCAATAGAA
AATTCGGACTCTCCAGTTAGAAGCATTCTGAAATCGCAAGCTTGGCAGCCTTTGGTAGAGGGTAGCGAGA
ACAAGGGAATGTTGAGAGAATATGGAGAGACAGAAAGCAAGAGAGCTTTGACAGGTCGAGACAGTGGGAT
GGAGAAGTATGGGTCCTTTGAGGAAGCAGAAGCATCCTACCCCATCCTGAACCGAGCCAGGGAAGGAGAC
AGCCATAAGGAATCTAAATATGCTGTTCCCAGAAGAGGAAGCCTGGAACGGGCGAACCCTCCCATCACCC
ACCTCGGGGATGAACCGAAGGAATTTTCCATGGCTAAAATGAATGCACAAGGAAACTTGGACTTGAGGGA
CAGGCTGCCCTTTGAAGAGAAGGTGGAGGTGGAGAATGTTATGAAAAGGAAGTTTTCACTAAGAGCGGCA
GAGTTCGGGGAGCCCACTTCCGAGCAGACGGGGACAGCTGCTGGGAAAACTATTGCTCAAACCACAGCCC
CCGTGTCCTGGAAGCCCCAGGATTCTTCGGAACAGCCACAGGAGAAGCTCTGCAAGAATCCATGTGCGAT
GTTTGCTGCTGGAGAGATCAAAACGCCGACAGGGGAGGGCCTTCTTGACTCACCCAGCAAAACCATGTCT
ATTAAAGAAAGATTGGCACTGTTGAAGAAAAGCGGGGAGGAAGATTGGAGAAACAGACTCAGCAGGAGGC
AGGAGGGCGGCAAGGCGCCGGCCAGCAGCCTGCACACCCAGGAAGCAGGGCGGTCCCTCATCAAGAAGCG
GGTCACAGAAAGTCGAGAGAGCCAAATGACGATTGAGGAGAGGAAGCAGCTCATCACTGTGAGAGAGGAG
GCCTGGAAGACGAGAGGCAGAGGAGCGGCCAACGACTCGACCCAGTTCACTGTGGCTGGCAGGATGGTGA
AGAAAGGTTTGGCGTCACCTACTGCCATAACCCCAGTAGCCTCACCCATTTGCGGTAAAACAAGAGGCAC
CACACCCGTTTCCAAACCCCTGGAAGATATCGAAGCCAGACCAGATATGCAGTTAGAATCGGACCTGAAG
TTGGACAGGCTGGAAACCTTTCTAAGAAGGCTGAATAACAAAGTTGGCGGGATGCACGAAACGGTGCTCA
CTGTCACCGGCAAATCTGTGAAGGAGGTGATGAAGCCAGATGATGATGAAACCTTTGCCAAATTTTACCG
CAGCGTGGATTATAATATGCCAAGAAGTCCTGTGGAGATGGATGAGGACTTCGATGTCATTTTCGATCCT
TATGCACCCAAATTGACGTCTTCCGTGGCCGAGCACAAGCGGGCAGTTAGGCCCAAGCGCCGGGTTCAGG
CCTCCAAAAACCCCCTGAAAATGCTGGCGGCAAGAGAAGATCTCCTTCAGGAATACACTGAGCAGAGATT
AAACGTTGCCTTCATGGAGTCAAAGCGGATGAAAGTAGAAAAGATGTCTTCCAACTCCAACTTCTCAGAA
GTCACCCTGGCGGGTTTAGCCAGTAAAGAAAACTTCAGCAACGTCAGCCTGCGGAGCGTCAACCTGACGG
AACAGAACTCTAACAACAGCGCCGTGCCCTACAAGAGGCTGATGCTGTTGCAGATTAAAGGAAGAAGACA
TGTGCAGACCAGGCTGGTGGAACCTCGAGCTTCGGCGCTCAACAGTGGGGACTGCTTCCTCCTGCTCTCT
CCCCACTGCTGCTTCCTGTGGGTAGGAGAGTTTGCAAACGTCATAGAAAAGGCGAAGGCCTCAGAACTTG
CAACTTTAATTCAGACAAAGAGGGAACTTGGTTGTAGAGCTACTTATATCCAAACCATTGAAGAAGGAAT
TAATACACACACTCATGCAGCCAAAGACTTCTGGAAGCTTCTGGGTGGCCAAACCAGTTACCAATCTGCT
GGAGACCCAAAAGAAGATGAACTCTATGAAGCAGCCATAATAGAAACTAACTGCATTTACCGTCTCATGG
ATGACAAACTTGTTCCTGATGACGACTACTGGGGGAAAATTCCGAAGTGCTCCCTTCTGCAACCCAAAGA
GGTACTGGTGTTTGATTTTGGTAGTGAAGTTTACGTATGGCATGGGAAAGAAGTCACATTAGCACAACGA
AAAATAGCATTTCAGCTGGCAAAGCACTTATGGAATGGAACCTTTGACTATGAGAACTGTGACATCAATC
CCCTGGATCCTGGAGAATGCAATCCGCTTATCCCCAGAAAAGGACAGGGGCGGCCCGACTGGGCGATATT
TGGGAGACTTACTGAACACAATGAGACGATTTTGTTCAAAGAGAAGTTTCTGGATTGGACGGAACTGAAG
AGATCGAATGAGAAGAACCCCGGGGAACTTGCCCAGCACAAGGAAGACCCCAGGACTGATGTCAAGGCAT
ACGATGTGACACGGATGGTGTCCATGCCCCAGACGACAGCAGGCACCATCCTGGACGGAGTGAACGTCGG
CCGTGGCTATGGCCTGGTGGAAGGACACGACAGGAGGCAGTTTGAGATCACCAGCGTTTCCGTGGATGTC
TGGCACATCCTGGAATTCGACTATAGCAGGCTCCCCAAACAAAGCATCGGGCAGTTCCATGAGGGGGATG
CCTATGTGGTCAAGTGGAAGTTCATGGTGAGCACGGCAGTGGGAAGTCGCCAGAAGGGAGAGCACTCGGT
GAGGGCAGCCGGCAAAGAGAAGTGCGTCTACTTCTTCTGGCAAGGCCGGCACTCCACCGTGAGTGAGAAG
GGCACGTCGGCGCTGATGACGGTGGAGCTGGACGAGGAAAGGGGGGCCCAGGTCCAGGTTCTCCAGGGAA
AGGAGCCCCCCTGTTTCCTGCAGTGTTTCCAGGGGGGGATGGTGGTGCACTCGGGGAGGCGGGAAGAGGA
AGAAGAAAATGTGCAAAGTGAGTGGCGGCTGTACTGCGTGCGTGGAGAGGTGCCCGTGGAAGGGAATTTG
CTGGAAGTGGCCTGTCACTGTAGCAGCCTGAGGTCCAGAACTTCCATGGTGGTGCTTAACGTCAACAAGG
CCCTCATCTACCTGTGGCACGGATGCAAAGCCCAGGCCCACACGAAGGAGGTCGGAAGGACCGCTGCGAA
CAAGATCAAGGAACAATGTCCCCTGGAAGCAGGACTGCATAGTAGCAGCAAAGTCACAATACACGAGTGT
GATGAAGGCTCCGAGCCACTCGGATTCTGGGATGCCTTAGGAAGGAGAGACAGGAAAGCCTACGATTGCA
TGCTTCAAGATCCTGGAAGTTTTAACTTCGCGCCCCGCCTGTTCATCCTCAGCAGCTCCTCTGGGGATTT
TGCAGCCACAGAGTTTGTGTACCCTGCCCGAGCCCCCTCTGTGGTCAGTTCCATGCCCTTCCTGCAGGAA
GATCTGTACAGCGCGCCCCAGCCAGCACTTTTCCTTGTTGACAATCACCACGAGGTGTACCTCTGGCAAG
GCTGGTGGCCCATCGAGAACAAGATCACTGGTTCCGCCCGCATCCGCTGGGCCTCCGACCGGAAGAGTGC
GATGGAGACTGTGCTCCAGTACTGCAAAGGAAAAAATCTCAAGAAACCAGCCCCCAAGTCTTACCTTATC
CACGCTGGTCTGGAGCCCCTGACATTCACCAATATGTTTCCCAGCTGGGAGCACAGAGAGGACATCGCTG
AGATCACAGAGATGGACACGGAAGTTTCCAATCAGATCACCCTCGTGGAAGACGTCTTAGCCAAGCTCTG
TAAAACCATTTACCCGCTGGCCGACCTCCTGGCCAGGCCACTCCCGGAGGGGGTCGATCCTCTGAAGCTT
GAGATCTATCTCACCGACGAAGACTTCGAGTTTGCACTAGACATGACGAGGGATGAATACAACGCCCTGC
CCGCCTGGAAGCAGGTGAACCTGAAGAAAGCAAAAGGCCTGTTCTGA

Translation (1788 aa):
MKRKERIARRLEGIENDTQPILLQSCTGLVTHRLLEEDTPRYMRASDPASPHIGRSNEEEETSDSSLEKQ
TRSKYCTETSGVHGDSPYGSGTMDTHSLESKAERIARYKAERRRQLAEKYGLTLDPEADSEYLSRYTKSR
KEPDAVEKRGGKSDKQEESSRDASSLYPGTETMGLRTCAGESKDYALHVGDGSSDPEVLLNIENQRRGQE
LSATRQAHDLSPAAESSSTFSFSGRDSSFTEVPRSPKHAHSSSLQQAASRSPSFGDPQLSPEARPRCTSH
SETPTVDDEEKVDERAKLSVAAKRLLFREMEKSFDEQNVPKRRSRNTAVEQRLRRLQDRSLTQPITTEEV
VIAATLQASAHQKALAKDQTNEGKELAEQGEPDSSTLSLAEKLALFNKLSQPVSKAISTRNRIDTRQRRM
NARYQTQPVTLGEVEQVQSGKLIPFSPAVNTSVSTVASTVAPMYAGDLRTKPPLDHNASATDYKFSSSIE
NSDSPVRSILKSQAWQPLVEGSENKGMLREYGETESKRALTGRDSGMEKYGSFEEAEASYPILNRAREGD
SHKESKYAVPRRGSLERANPPITHLGDEPKEFSMAKMNAQGNLDLRDRLPFEEKVEVENVMKRKFSLRAA
EFGEPTSEQTGTAAGKTIAQTTAPVSWKPQDSSEQPQEKLCKNPCAMFAAGEIKTPTGEGLLDSPSKTMS
IKERLALLKKSGEEDWRNRLSRRQEGGKAPASSLHTQEAGRSLIKKRVTESRESQMTIEERKQLITVREE
AWKTRGRGAANDSTQFTVAGRMVKKGLASPTAITPVASPICGKTRGTTPVSKPLEDIEARPDMQLESDLK
LDRLETFLRRLNNKVGGMHETVLTVTGKSVKEVMKPDDDETFAKFYRSVDYNMPRSPVEMDEDFDVIFDP
YAPKLTSSVAEHKRAVRPKRRVQASKNPLKMLAAREDLLQEYTEQRLNVAFMESKRMKVEKMSSNSNFSE
VTLAGLASKENFSNVSLRSVNLTEQNSNNSAVPYKRLMLLQIKGRRHVQTRLVEPRASALNSGDCFLLLS
PHCCFLWVGEFANVIEKAKASELATLIQTKRELGCRATYIQTIEEGINTHTHAAKDFWKLLGGQTSYQSA
GDPKEDELYEAAIIETNCIYRLMDDKLVPDDDYWGKIPKCSLLQPKEVLVFDFGSEVYVWHGKEVTLAQR
KIAFQLAKHLWNGTFDYENCDINPLDPGECNPLIPRKGQGRPDWAIFGRLTEHNETILFKEKFLDWTELK
RSNEKNPGELAQHKEDPRTDVKAYDVTRMVSMPQTTAGTILDGVNVGRGYGLVEGHDRRQFEITSVSVDV
WHILEFDYSRLPKQSIGQFHEGDAYVVKWKFMVSTAVGSRQKGEHSVRAAGKEKCVYFFWQGRHSTVSEK
GTSALMTVELDEERGAQVQVLQGKEPPCFLQCFQGGMVVHSGRREEEEENVQSEWRLYCVRGEVPVEGNL
LEVACHCSSLRSRTSMVVLNVNKALIYLWHGCKAQAHTKEVGRTAANKIKEQCPLEAGLHSSSKVTIHEC
DEGSEPLGFWDALGRRDRKAYDCMLQDPGSFNFAPRLFILSSSSGDFAATEFVYPARAPSVVSSMPFLQE
DLYSAPQPALFLVDNHHEVYLWQGWWPIENKITGSARIRWASDRKSAMETVLQYCKGKNLKKPAPKSYLI
HAGLEPLTFTNMFPSWEHREDIAEITEMDTEVSNQITLVEDVLAKLCKTIYPLADLLARPLPEGVDPLKL
EIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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