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Report for CCDS71179.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71179.1 Public Mus musculus 2 Ralgapb 23 108 98 CCDS HistoryNCBI Gene:228850Re-query CCDS DB by CCDS ID:71179.1Re-query CCDS DB by GeneID:228850See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71179.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109486.8 ENSMUSP00000105112.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109486.8Link to Ensembl Protein Viewer:ENSMUSP00000105112.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109486Re-query CCDS DB by Protein ID:ENSMUSP00000105112
Original member Current member NCBI NM_001291138.1 NP_001278067.1 Accepted alive Link to Nucleotide Sequence:NM_001291138.1Link to Protein Sequence:NP_001278067.1Re-query CCDS DB by Nucleotide ID:NM_001291138Re-query CCDS DB by Protein ID:NP_001278067Link to BLAST:NP_001278067.1

Chromosomal Locations for CCDS 71179.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 158420844 158421029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158426165 158426367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158430417 158430580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158432734 158432920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158435458 158435589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158436490 158436668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158437003 158437151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158437260 158437476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158440770 158440971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158443238 158443405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158443827 158443941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158444573 158444720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158446129 158446193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158448320 158448449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158450177 158450310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158454124 158454306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158456451 158456602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158462071 158462258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158464072 158464178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158465819 158465971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158466736 158466945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158473123 158473281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158476105 158476270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158477641 158477763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158482365 158482501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158492364 158492472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158492935 158493013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158494625 158494773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 158495451 158495644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4488 nt):
ATGTACTCTGAGTGGCGGTCACTGCATTTGGTGATTCAGAGTGATCAAGGCCATACCAGTGTGCTACACA
GCTATCCAGAGAGTGTTGGGCGAGAGGTGGCGAATGCAGTGGTCCGTCCTCTTGGGCAGGCATTAGGTAC
TTCTTCAGTGGCTGGTAGTGAGAGTTTATTAAAAACTGACAAAGAAGTAAAATGGACCATGGAAGTAATT
TGCTATGGACTGACCCTTCCATTAGATGGAGAGACTGTAAAATATTGTGTTGATGTATATACAGATTGGA
TTATGGCTTTGGTGTTGCCAAAAGATTCTATTCCATTACCCATTATTAAAGAACCTAATCTATATGTTCA
AAGTATATTAAAACATTTACAAAATCTTTTTGTACCAAGACAGGAACAGGGCTCCAGTCAAATCCGACTA
TGCTTACAAGTTCTGAGAGCCATTCAGAAACTGGCCCGGGAGTCATCCATCATGGCTCGAGAAACCTGGG
AAGTCTTACTGTTGTTTCTTCTGCAAATTAATGACATACTTCTGGCCCCACCAACTGTTCAAGGTGGCAT
TGCTGAGAATCTAGCAGAGAAGCTGATTGGTGTTCTCTTTGAAGTTTGGTTACTAGCTTGCACCCGGTGC
TTCCCAACACCTCCTTATTGGAAGACAGCCAAGGAGATGGTGGCTAACTGGAGGCACCACCCTGCAGTGG
TGGAGCAGTGGAGCAAGGTTATCTGTGCACTGACCTCCAGATTGCTCCGCTTTACATACGGTCCTTCATT
TCCTCCATTTAAAGTTCCTGATGAAGATGCCAATCTCATCCCTCCAGAAATGGACAATGAGTGTATTGCA
CAAACATGGTTTCGATTTTTACACATGCTAAGTAACCCCGTGGATCTGAGTAACCCAGCTGTTATAAGCT
CAACTCCCAAGTTTCAAGAACAGTTCCTGAATGTGAGCGGGATGCCACAGGAGCTGAGCCAGTACCCCTG
CCTTAAACATCTGCCTCAGATATTCTTTCGTGCCATGCGTGGAATCAGCTGTCTGGTGGATGCATTCTTA
GGCATTTCTCGACCTCGATCAGACAGTGCTCCCCCAACACCCGTGAATAGATTAAGTATGCCCCAGAGTG
CTGCTGTGAATACCACACCACCACATAACCGGAGGCACCGGGCTGTTACTGTGAACAAGGCCACAATGAA
GACGAGTACAGTTACTACTGCTCACACCTCAAAAGTCCAGCACCAGGCATCCTCCACCTCTCCTCTGTCC
AGTCCAAATCAGACTAGTTCAGAACCCAGGCCGCTGCCTGCCCCCCGAAGACCAAAGGTTAACAGCATCT
TGAATCTCTTTGGATCGTGGTTATTCGATGCAGCATTTGTTCACTGTAAACTCCATAATGGAATAAACAG
AGACAACAGCATGACTGCCATTGCAACCCAAGCTAGCATGGAGTTTCGACGGAAAGGGTCCCAAATGTCA
ACAGACACCATGGTTTCCAACCCTGTGTTTGATGCCAGTGAATTTCCTGATAACTATGAAGCAGGAAGAG
CTGAGGCTTGTGGGACATTATGTAGGATTTTTTGTAGCAAGAAGACTGGAGAAGAGATTCTGCCAGCTTA
TTTATCCAGATTTTACATGCTTTTAATTCAAGGTTTGCAGATAAATGATTATGTATGCCATCCTGTCTTG
GCCAGCGTTATTCTAAACTCCCCTCCTTTGTTCTGCTGTGACTTGAAAGGGATTGATGTTGTGGTTCCTT
ACTTTATTTCAGCTCTTGAAACCATTTTGCCTGACAGAGAACTCTCAAAATTCAAAAGCTATGTAAATCC
AACAGAATTGAGAAGGTCATCCATTAATATCCTGCTTTCTTTGTTGCCCCTCCCTCATCATTTTGGCACA
GTCAGATCTGAGGTGGTCCTAGAAGGAAAGTTTAGTAATGATGACAGCTCTTCTTATGATAAACCAATAA
CTTTTCTGTCCCTGAAGCTGAGACTTGTGAATATACTAATAGGTGCCTTGCAAACAGAAACGGACCCTAA
CAACACCCAAATGATACTAGGGGCAATGTTAAATATTGTTCAAGATTCTGCACTTTTAGAAGCCATTGGT
TGCCAAATGGAAATGGGTGGTGGAGAAAACAACCTGAAGAGTCATAGTCGCACAAACAGTGGCATTAGCT
CAGCAAGTGGAGGAAGCACAGAGCCTACAACCCCTGATAGCGAGAGACCTGCTCAAGCTCTTCTGAGGGA
TTATGCTCTTAATACAGATTCAGCTGCTGGGCTCCTGATTCGCAGCATTCATCTCGTCACTCAACGACTC
AACTCCCAGTGGCGGCAAGATATGAGCATATCCTTGGCAGCTCTAGAGCTCCTCTCTGGCCTGGCAAAGG
TGAAGGTGATGGTTGACTCAGGAGACCGGAAGCGTGCCATCAGTTCTGTGTGCAGCTACATCGTATACCA
ATGCAGTCGGCCAGCTCCTCTTCACTCCCGGGATCTGCACTCCATGATAGTGGCAGCATTTCAGTGTCTC
TGTGTCTGGCTGACAGAGCACCCTGATATGCTGGATGAAAAGGATTGCCTTAAGGAAGTACTGGAGATTG
TAGAACTGGGTATCTCAGGAAGCAAATCCAAGAACAGTGAGCAAGAAGTCAAGTACAAAGGTGATAAGGA
GCCGAACCCTGCATCCATGAGGGTAAAGGACGCCGCCGAAGCCACTCTAACATGTATCATGCAGTTGCTT
GGCGCATTTCCTTCACCCAGTGGTCCTGCTTCTCCTTGTAGTCTGGTGAATGAGACCACTCTGATCAAAT
ACTCCAGGCTGCCAACCATAAACAAGCATAGTTTCCGGTACTTTGTTTTGGATAACAGTGTCATCCTGGC
AATGCTGGAGCAACCGCTTGGAAATGAGCAGAATGACTTTTTCCCCTCTGTCACTGTGCTGGTCCGGGGA
ATGTCTGGAAGACTTGCGTGGGCTCAGCAGCTTTGCCTTTTACCCAGAGGAGCAAAAGCAAATCAGAAGC
TTTTTGTGCCTGAACCTCGCCCAGTTCCTAAAAATGATGTTGGATTTAAATATTCTGTGAAACATCGGCC
ATTTCCTGAAGAGGTGGACAAGATTCCTTTTGTAAAAGCAGACTTGAGCATTCCAGATTTACATGAAATT
GTCACTGAAGAATTAGAAGAGAGGCATGAAAAATTAAGAAGTGGTATGGCACAACAAATTGCTTATGAGA
TGCACCTGGAACAGCAGAGCGAGGGGGAACTGCAGAAGCGAAGCTTCCCTGACCCTGTTACGGACTGTAA
GCCTCCACCTCCTGCCCAGGAATTTCAGACAGCCCGCCTTTTCCTTTCTCACTTTGGATTTTTATCCTTA
GAGGCATTAAAGGAACCTGCAAATAGTCGTCTACCTCCTCATCTTATTGCACTCGATTCTACCATACCTG
GATTTTTTGATGACATTGGGTATCTGGATCTCCTGCCATGCCGGCCTTTTGACACTGTTTTTATTTTCTA
CATGAAGCCAGGTCAGAAAACAAACCAAGAGATTTTAAAGAATGTGGAGTCTTCCAGAAATGTTCAGCCA
CATTTCCTAGAATTTTTGCTCTCCCTGGGCTGGTCAGTAGATGTGGGGAAACACCCCGGTTGGACAGGAC
ATGTGTCCACCAGTTGGTCAATCAATAGTTGTGATGATGGTGAAGGGTCTGAACCAGATGAAATAACTTC
CTCTGAAGACGTTGGGGCTAGCATTTTCAACGGGCAGAAGAAGGTGCTGTATTATGCTGATGCCCTAACA
GAAATAGCTTTTGTGGTTCCTTCTCCTGTGGAGTCACTGACTGATTCATTGGAAAGTAACATCTCAGACC
AAGATAGTGACTCAAATATGGATCTTATGCCGGGAATTCTGAAGCAGCCACCCCTGACACTTGAGTTGGT
CCCCAATCACACAGACAGTCTTAATTCCTCACAGAGGCTCAGTCCCAGTTCCAGAATGAAGAAGCTGCCT
CAGGGTCGCCCTGTGCCCCCGCTTGGACCTGAGACAAGAGTATCTGTAGTCTGGGTGGAACGCTACGATG
ATATAGAAAACTTTCCACTCTCAGATCTGATGACAGAGATCAGCACTGGTGTAGAGACTACTGCAAATAG
TAGCACTTCTCTGAGATCTACAACTCTTGAAAAAGAAGTCCCAGTAATCTTCATTCACCCTTTAAACACT
GGATTGTTCCGGATAAAAATCCAAGGAGCCACTGGAAAATTTAACATGGTCATACCTCTGGTTGATGGGA
TGATAGTCAGCCGTCGAGCACTTGGCTTTCTGGTGAGGCAGACGGTAATAAACATTTGTAGAAGAAAGAG
ACTGGAGAGTGATTCCTACAGTCCACCACATGTCCGTCGGAAACAGAAAATCACTGACATTGTCAACAAA
TATCGGAATAAGCAGTTGGAGCCAGAGTTTTATACTGCCCTTTTCCAGGAGGTTGGACTCAAGAACTGCA
GTTCTTAG

Translation (1495 aa):
MYSEWRSLHLVIQSDQGHTSVLHSYPESVGREVANAVVRPLGQALGTSSVAGSESLLKTDKEVKWTMEVI
CYGLTLPLDGETVKYCVDVYTDWIMALVLPKDSIPLPIIKEPNLYVQSILKHLQNLFVPRQEQGSSQIRL
CLQVLRAIQKLARESSIMARETWEVLLLFLLQINDILLAPPTVQGGIAENLAEKLIGVLFEVWLLACTRC
FPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPPFKVPDEDANLIPPEMDNECIA
QTWFRFLHMLSNPVDLSNPAVISSTPKFQEQFLNVSGMPQELSQYPCLKHLPQIFFRAMRGISCLVDAFL
GISRPRSDSAPPTPVNRLSMPQSAAVNTTPPHNRRHRAVTVNKATMKTSTVTTAHTSKVQHQASSTSPLS
SPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDNSMTAIATQASMEFRRKGSQMS
TDTMVSNPVFDASEFPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQINDYVCHPVL
ASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKSYVNPTELRRSSINILLSLLPLPHHFGT
VRSEVVLEGKFSNDDSSSYDKPITFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIG
CQMEMGGGENNLKSHSRTNSGISSASGGSTEPTTPDSERPAQALLRDYALNTDSAAGLLIRSIHLVTQRL
NSQWRQDMSISLAALELLSGLAKVKVMVDSGDRKRAISSVCSYIVYQCSRPAPLHSRDLHSMIVAAFQCL
CVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNSEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLL
GAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLEQPLGNEQNDFFPSVTVLVRG
MSGRLAWAQQLCLLPRGAKANQKLFVPEPRPVPKNDVGFKYSVKHRPFPEEVDKIPFVKADLSIPDLHEI
VTEELEERHEKLRSGMAQQIAYEMHLEQQSEGELQKRSFPDPVTDCKPPPPAQEFQTARLFLSHFGFLSL
EALKEPANSRLPPHLIALDSTIPGFFDDIGYLDLLPCRPFDTVFIFYMKPGQKTNQEILKNVESSRNVQP
HFLEFLLSLGWSVDVGKHPGWTGHVSTSWSINSCDDGEGSEPDEITSSEDVGASIFNGQKKVLYYADALT
EIAFVVPSPVESLTDSLESNISDQDSDSNMDLMPGILKQPPLTLELVPNHTDSLNSSQRLSPSSRMKKLP
QGRPVPPLGPETRVSVVWVERYDDIENFPLSDLMTEISTGVETTANSSTSLRSTTLEKEVPVIFIHPLNT
GLFRIKIQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYSPPHVRRKQKITDIVNK
YRNKQLEPEFYTALFQEVGLKNCSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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