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Report for CCDS70769.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70769.1 Public Mus musculus 17 Unkl 23 108 98 CCDS HistoryNCBI Gene:74154Re-query CCDS DB by CCDS ID:70769.1Re-query CCDS DB by GeneID:74154See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70769.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000160896.7 ENSMUSP00000124276.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160896.7Link to Ensembl Protein Viewer:ENSMUSP00000124276.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160896Re-query CCDS DB by Protein ID:ENSMUSP00000124276
Original member Current member NCBI NM_001290736.1 NP_001277665.1 Accepted alive Link to Nucleotide Sequence:NM_001290736.1Link to Protein Sequence:NP_001277665.1Re-query CCDS DB by Nucleotide ID:NM_001290736Re-query CCDS DB by Protein ID:NP_001277665Link to BLAST:NP_001277665.1
Original member Current member NCBI NM_001357877.1 NP_001344806.1 Accepted alive Link to Nucleotide Sequence:NM_001357877.1Link to Protein Sequence:NP_001344806.1Re-query CCDS DB by Nucleotide ID:NM_001357877Re-query CCDS DB by Protein ID:NP_001344806Link to BLAST:NP_001344806.1

Chromosomal Locations for CCDS 70769.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 25201136 25201175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25205599 25205734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25208089 25208206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25209554 25209638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25210804 25210886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25213047 25213106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25218578 25218755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25228583 25228666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25229239 25229466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25230207 25230409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25230521 25230775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25231712 25231867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGATCGAGAAGATTCTTGGTGAGGACCCTCGGTGGCAAGACAGTAACTTCGTATTGGGCAGCTATAAGA
CTGAGCAGTGCCCGAAGCCACCACGCCTATGTCGCCAGGGCTACGCCTGTCCACACTACCACAACAGCAG
AGACCGCCGTCGGAACCCCAGGAGGTTCCAGTACAGGTCTACGCCCTGTCCTAGTGTGAAGCACGGTGAC
GAGTGGGGCGAGCCCTCACGGTGTGACGGTGGGGACAGCTGTCAGTACTGCCATTCCCGCACGGAGCAGC
AGTTCCATCCTGAGATCTACAAATCTACAAAATGCAACGATATGCGCCAAACTGGCTACTGCCCTCGGGG
CCCTTTCTGTGCCTTTGCACACACTGAGAAGAGCCTGGCTATGGTGAACGAGTGGAGCTGCCGTGATCTC
AGTTCCAACAGCACCTCAGCTTATAGCAGCCAGCCTGGAAGTGCCAAAAGGAAAGACTCCCCCTCTGAAG
GAAGCCAGAAAGCTACTGAGGACAGCAAGCAGAACCACCTCGCTGTGTTCTCAGTGGCTCACCCACTGGC
CCACAGCATAAGCTCCAGTGTGGCATCCAGCCTGGCGTCCAGCACTGGCTCGGGCAGCTCCTCCCCCACC
ACACTGCCTACCCTCCCTGCCCGTGCCCTTCCACTGGATCCCGCCGGCAACACTGTGGGGGCAGTCATAG
GTTCTGCCTTAGATCTTCGTCTTAGTGACATAAACATCGCGTCCTTAGATAAAGACTTAGAAGAACAGGA
CCTTGGATTGACAGGTCCCAGGTCGCTGGCAGGCTCAGCACCCGTCACCATTCCGGGCTCCCTGCCCCGC
TCGCCATCCTTGCACTCGTCCTCATCCCTATCCACCTCCCCACTCAGCTCGCTCTCCCAGTCCCTGTCGG
GGCCACTCGTCTCCTCGGCCATGACGCCCCCCCAGCAGCCACCACCCCTCCGGTCGGAGCCGGCTACGCT
GGGCTCTGCAGCCTCATCTTACAGCTCTTTAGGTCTGAACGGCGTTCCCGGGAGCATCTGGGACTTTGTT
TCTGGCAGCTTCTCTCCTAGCCCATCCCCCATTCTGAACTCCGGCCCTTCGGCTTCCTCAAGTGCAAGTC
CAAACAGTGCTGAGCTGGCACGGGTCAGGCGGCAGCTAGACGAGGCCAAGAGGAAGATCAGGCAATGGGA
AGAATCTTGGCAGCAAGTGAAGCAGGCCTGTGATGCCTGGCAGAGAGAGGCTCAGGAGGCCAAGGAAAGA
GCCCGTGTGGCAGACAGTGACCGGCAGCTGGCCCTGCAGAGGAAAGAAGAGGTGGAAGCCAAGGTGAAGC
AGCTGCAGGAAGAATTAGAGGGCCTGGGTTTGTCCTCACTGCCAGGGCTTCAGAGCTTGGGTGACATCAG
TGACATCCCTCTCCCCAAGCTGCATTCTCTCCAGAGCAAGCTGCGCTTGGACTTGGAGGCTGTGGATGGG
GTGATCTTCCAGCTCCGTGCCAAACAGTGTGTGGCCTGCCAGGAGCGGGCCCATGGCACTGTCCTGCGGC
CCTGCCAGCACCGTGTCTTATGCGAACCATGTGCGGCCAGTACCCCTGAGTGCCCCTACTGCAAGGGCCA
GCCCCTACCATGGTGA

Translation (541 aa):
MIEKILGEDPRWQDSNFVLGSYKTEQCPKPPRLCRQGYACPHYHNSRDRRRNPRRFQYRSTPCPSVKHGD
EWGEPSRCDGGDSCQYCHSRTEQQFHPEIYKSTKCNDMRQTGYCPRGPFCAFAHTEKSLAMVNEWSCRDL
SSNSTSAYSSQPGSAKRKDSPSEGSQKATEDSKQNHLAVFSVAHPLAHSISSSVASSLASSTGSGSSSPT
TLPTLPARALPLDPAGNTVGAVIGSALDLRLSDINIASLDKDLEEQDLGLTGPRSLAGSAPVTIPGSLPR
SPSLHSSSSLSTSPLSSLSQSLSGPLVSSAMTPPQQPPPLRSEPATLGSAASSYSSLGLNGVPGSIWDFV
SGSFSPSPSPILNSGPSASSSASPNSAELARVRRQLDEAKRKIRQWEESWQQVKQACDAWQREAQEAKER
ARVADSDRQLALQRKEEVEAKVKQLQEELEGLGLSSLPGLQSLGDISDIPLPKLHSLQSKLRLDLEAVDG
VIFQLRAKQCVACQERAHGTVLRPCQHRVLCEPCAASTPECPYCKGQPLPW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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