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Report for CCDS70766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70766.1 Public Mus musculus 17 Zscan10 23 108 98 CCDS HistoryNCBI Gene:332221Re-query CCDS DB by CCDS ID:70766.1Re-query CCDS DB by GeneID:332221See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70766.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120967.7 ENSMUSP00000113386.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120967.7Link to Ensembl Protein Viewer:ENSMUSP00000113386.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120967Re-query CCDS DB by Protein ID:ENSMUSP00000113386
Original member Current member NCBI NM_001289481.1 NP_001276410.1 Accepted alive Link to Nucleotide Sequence:NM_001289481.1Link to Protein Sequence:NP_001276410.1Re-query CCDS DB by Nucleotide ID:NM_001289481Re-query CCDS DB by Protein ID:NP_001276410Link to BLAST:NP_001276410.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276410.1 750 Q3URR7-2 750 100% 0 0

Chromosomal Locations for CCDS 70766.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 23605572 23605964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23607124 23607388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23607580 23607644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23608108 23608165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23609267 23609466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23609563 23610834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2253 nt):
ATGCTGGCGGAACCAGTCCCTGATGCCCTGGAACAAGAGCATCCCGGAGCAGTGAAGTTGGAGGAGGATG
AAGTTGGCGAGGAGGATCCCAGGCTCGCAGAGTCCAGGCCTAGGCCTGAGGTGGCCCACCAGCTTTTCAG
ATGCTTCCAGTATCAGGAAGATATGGGGCCACGGGCATCCCTGGGCCGGCTCCGGGAACTCTGCAACCAC
TGGCTGCGACCGGCTCTGCACACCAAGAAGCAGATCCTGGAGCTGCTGGTACTGGAGCAGTTCCTGAGTG
TCCTGCCCCCGCATGTGCTGAGCCGGCTGCACGGCCAACCGCTCCGGGACGGAGAGGAGGTGGTACAGCT
ATTGGAGGGCGTGCCCAGAGACATCAGCCACATGGGGCCACTGGATTTTAGCTTCAGTGCTGGCAAGAAT
GCCCCTGCAGACATCATCTCAGAGGAACAAAATAGCCCTTCCCAGGTCCCCAGCCACAGCCCCCAGACGG
AGTTGCCCTCAGAAGAGATTCCAGCCCTACATCCACTGAATGAGTTACCTCCACCTCAGCCAGCACCCAT
AAGGCCTGCTGAGCCTGAGGAGTGGAGACTGGCCCCCAGTTCAAATTGGCCAATGAGCCCAGAGCCCCAG
GAGATACTCCAGGACCCACGAGAAAGCAACCCTTCCCAGGGCCCTTCATGGCTTGAGGAAAATTCCAGAG
ACCAAGAGCTGGCGGCTGTGTTGGAGTCCCTCACCTTTGAGGATACCTCAGAGAAGAGAGCTTGGCCTGC
AAACCCTCTTGGATTTGGAAGCAGAATGCCTGACAATGAGGAACTTAAAGTTGAAGAGCCTAAAGTGACT
ACTTGGCCTGTCGTCATTGGAGCAGAGTCCCAGACAGAGAAACCTGAAGTTGCAGGAGAGCCTCTTACGC
AAACTGTAGGGCAGGAGACCAGCAGCACTGGTTGGGGAGGTACTCCTGCTGACGGCAGTGAAGTTGTGAA
GGCCCACCAGTTACAATCTCACCCCAACTTGCAACCTCACCCAAGCTCTCGATCCTTCCGATGTCTGTGG
TGTGGGAAGACTTTTGGACGCAGCTCGATCCTCAAGCTGCACATGCGCACTCACACAGACGAGCGGCCGC
ACGCCTGTCATCTCTGCAACCGCCGCTTCCGCCAGAGCTCACACCTGACGAAGCACTTGCTAACGCATTC
CTCTGAGCCTGCCTTCCGATGCGCCGAGTGTAACCAGGGTTTTCAGCGTCGCTCCAGCCTCATGCAGCAC
CTGCTGGCACATGCCCAGGGAAAGAATCTCACGCCAAATCCAGAAGGCAAGACAAAAGTGCCAGAGATGG
CAGCTGTCCTCTGTTCCCACTGCGGGCAGACCTTCAAGCGGCGCTCTAGCTTAAAGCGTCACCTGCGTAA
CCATGCCAAGGACAAGGACCATCTGTCCTCTGAAGACCCTGGCAGCCTTAGCTCTAGCCAGGAGAGTAAC
CCCTATGTGTGTAGTGACTGTGGCAAGGCCTTCCGACAAAGCGAGCAACTAATGATCCACACTAGGCGAG
TCCATACCCGTGAACGACCCTTCTCCTGCCAGGTCTGTGGCCGCTGCTTTACCCAAAATTCCCAGCTGAT
CAGCCACCAGCAGATTCATACGGGTGAGAAGCCTCACGCCTGTCCTCAGTGCAGCAAACGCTTTGTGAGA
CGAGCTGGCCTTGCTCGGCATCTGTTGACCCACGGTAGCCTCCGGCCTTACCACTGTGCCCAATGTGGCA
AAAGCTTTCGCCAAATGCGAGACCTAACCCGCCACGTACGCTGCCACACGGGGGAGAAGCCCTGCCGATG
CAACGAATGTGGAGAGGGGTTCACCCAGAATGCCCACCTGGCACGCCACCAACGCATCCACACGGGGGAG
AAGCCCCACGCCTGTGACATCTGTGGTCACCGCTTTCGTAACAGCTCCAACTTGGCCCGCCACCGCCGCA
GCCACACTGGCGAACGGCCCTATAGCTGTCCAACCTGTGGCCGCAGTTTCCGGCGCAATGCGCACCTGCA
GCGCCACCTGATCACACACACAGGGTCAAAGCAAGAAAAGGAAGTTCCTCAGGAGTGCCCTGAGTGTGGC
AAGAGCTTCAATCGCAGCTGCAACTTGCTGCGCCACCTGCTGGTTCACACCGGTGCAAGGCCTTACTCCT
GTGCACTGTGTGGCCGCAGCTTCAGCCGTAATTCACACCTGCTGCGCCACCTGCGAACCCATGCCCGGGA
ATCGCTGTACTAA

Translation (750 aa):
MLAEPVPDALEQEHPGAVKLEEDEVGEEDPRLAESRPRPEVAHQLFRCFQYQEDMGPRASLGRLRELCNH
WLRPALHTKKQILELLVLEQFLSVLPPHVLSRLHGQPLRDGEEVVQLLEGVPRDISHMGPLDFSFSAGKN
APADIISEEQNSPSQVPSHSPQTELPSEEIPALHPLNELPPPQPAPIRPAEPEEWRLAPSSNWPMSPEPQ
EILQDPRESNPSQGPSWLEENSRDQELAAVLESLTFEDTSEKRAWPANPLGFGSRMPDNEELKVEEPKVT
TWPVVIGAESQTEKPEVAGEPLTQTVGQETSSTGWGGTPADGSEVVKAHQLQSHPNLQPHPSSRSFRCLW
CGKTFGRSSILKLHMRTHTDERPHACHLCNRRFRQSSHLTKHLLTHSSEPAFRCAECNQGFQRRSSLMQH
LLAHAQGKNLTPNPEGKTKVPEMAAVLCSHCGQTFKRRSSLKRHLRNHAKDKDHLSSEDPGSLSSSQESN
PYVCSDCGKAFRQSEQLMIHTRRVHTRERPFSCQVCGRCFTQNSQLISHQQIHTGEKPHACPQCSKRFVR
RAGLARHLLTHGSLRPYHCAQCGKSFRQMRDLTRHVRCHTGEKPCRCNECGEGFTQNAHLARHQRIHTGE
KPHACDICGHRFRNSSNLARHRRSHTGERPYSCPTCGRSFRRNAHLQRHLITHTGSKQEKEVPQECPECG
KSFNRSCNLLRHLLVHTGARPYSCALCGRSFSRNSHLLRHLRTHARESLY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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