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Report for CCDS7058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7058.1 Public Homo sapiens 10 ADARB2 24 110 108 CCDS HistoryNCBI Gene:105Re-query CCDS DB by CCDS ID:7058.1Re-query CCDS DB by GeneID:105See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381312.6 ENSP00000370713.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381312.6Link to Ensembl Protein Viewer:ENSP00000370713.1Re-query CCDS DB by Nucleotide ID:ENST00000381312Re-query CCDS DB by Protein ID:ENSP00000370713
Original member Current member NCBI NM_018702.4 NP_061172.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018702.4Link to Protein Sequence:NP_061172.1Re-query CCDS DB by Nucleotide ID:NM_018702Re-query CCDS DB by Protein ID:NP_061172Link to BLAST:NP_061172.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061172.1 739 Q9NS39-1 739 100% 0 0

Chromosomal Locations for CCDS 7058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 1183193 1183369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1184861 1185039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1199966 1200147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1216951 1217119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1233694 1233845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1242131 1242299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1270955 1271069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1363028 1363917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1379074 1379160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1737051 1737150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2220 nt):
ATGGCCTCGGTCCTGGGGAGCGGCAGAGGGTCTGGAGGGCTGAGCAGTCAACTCAAATGCAAGTCCAAGA
GGAGGAGGAGGCGGAGGTCCAAGCGGAAAGATAAAGTAAGCATATTGTCAACCTTCCTCGCTCCTTTCAA
GCACCTGAGTCCTGGCATCACAAACACGGAGGATGACGACACCCTCAGTACCAGCAGCGCGGAGGTGAAG
GAGAACCGCAACGTGGGCAACCTGGCCGCGCGGCCACCGCCCTCCGGGGACCGGGCCCGGGGCGGCGCGC
CCGGCGCGAAGAGGAAGCGGCCGCTGGAGGAGGGGAATGGGGGCCACTTGTGCAAACTGCAGCTGGTCTG
GAAGAAGCTGTCGTGGTCGGTGGCGCCCAAGAACGCGCTGGTGCAGCTGCACGAGCTGAGGCCGGGCCTG
CAGTACCGGACAGTGTCGCAGACGGGCCCGGTGCATGCCCCGGTCTTCGCGGTAGCGGTGGAGGTGAACG
GGCTCACGTTCGAGGGCACAGGCCCCACCAAGAAGAAGGCCAAGATGCGCGCGGCGGAGCTGGCACTCAG
GTCCTTCGTGCAGTTCCCCAACGCCTGCCAGGCGCACCTGGCCATGGGCGGGGGCCCGGGCCCCGGCACG
GACTTCACCTCCGACCAGGCCGATTTCCCCGACACGCTCTTCCAGGAGTTCGAGCCCCCGGCGCCGCGCC
CCGGACTCGCGGGAGGCCGCCCCGGGGACGCCGCGCTTCTGTCCGCGGCCTACGGGCGACGGCGGCTGCT
GTGCCGCGCGCTGGACCTGGTGGGCCCGACCCCCGCCACCCCCGCGGCCCCGGGCGAGCGCAACCCCGTG
GTGCTGCTGAACCGCCTGCGCGCCGGGCTGCGCTACGTGTGTCTGGCAGAACCGGCCGAGCGGCGCGCGC
GGAGCTTCGTGATGGCCGTGAGCGTGGACGGCAGGACGTTCGAGGGCTCGGGGCGCAGCAAGAAGCTGGC
CCGGGGTCAGGCCGCGCAGGCCGCACTGCAGGAGCTGTTCGACATCCAGATGCCCGGCCACGCGCCCGGC
AGGGCCAGGAGGACGCCAATGCCGCAGGAATTCGCAGACTCCATATCCCAGCTGGTCACACAGAAGTTCC
GCGAGGTGACGACGGACCTCACGCCCATGCACGCCCGCCATAAAGCGCTGGCAGGAATCGTCATGACCAA
AGGCCTGGATGCTCGGCAGGCGCAGGTCGTGGCCCTGTCCTCGGGGACCAAGTGCATCAGCGGCGAGCAC
CTCAGTGACCAGGGGCTGGTGGTGAATGACTGCCACGCGGAGGTCGTGGCCCGGCGGGCGTTCCTGCACT
TCCTCTACACGCAGCTGGAGCTGCACCTGAGCAAGCGGCGCGAGGACTCAGAGCGATCGATATTCGTGCG
GTTAAAAGAAGGTGGCTACCGGCTGCGAGAGAACATCCTCTTCCATCTCTACGTGAGCACCTCCCCCTGT
GGAGACGCAAGACTCCACTCTCCCTACGAGATCACCACAGACCTGCACAGCAGCAAACACCTCGTCAGGA
AGTTCCGCGGGCACCTGCGCACCAAGATCGAGTCCGGGGAAGGGACGGTCCCCGTGCGTGGCCCCAGCGC
AGTGCAGACCTGGGACGGCGTCCTGCTGGGGGAGCAGCTGATCACCATGTCCTGCACGGACAAGATCGCC
AGGTGGAACGTCCTGGGGCTGCAGGGCGCGCTCCTGTCCCACTTCGTGGAGCCCGTGTACCTGCAGAGCA
TCGTGGTGGGCAGCCTGCACCACACGGGCCACCTCGCACGCGTCATGAGCCACCGCATGGAGGGTGTCGG
CCAGCTGCCCGCCTCCTACCGGCACAACCGGCCTCTCCTCAGCGGCGTGAGTGACGCCGAGGCGCGCCAG
CCGGGGAAGTCGCCCCCCTTCAGCATGAACTGGGTCGTGGGCAGCGCGGACCTGGAGATTATCAACGCCA
CCACTGGGCGGAGGAGCTGTGGGGGCCCATCCCGGCTCTGCAAGCACGTGCTGTCTGCACGGTGGGCGCG
GCTGTATGGCAGGCTGAGCACACGGACACCCAGCCCTGGAGACACGCCCTCCATGTACTGTGAGGCCAAG
CTGGGGGCGCACACCTACCAGTCTGTGAAACAGCAGCTGTTCAAGGCCTTTCAGAAGGCTGGCCTGGGCA
CCTGGGTGAGGAAACCACCGGAGCAGCAGCAGTTTCTACTGACTCTCTAG

Translation (739 aa):
MASVLGSGRGSGGLSSQLKCKSKRRRRRRSKRKDKVSILSTFLAPFKHLSPGITNTEDDDTLSTSSAEVK
ENRNVGNLAARPPPSGDRARGGAPGAKRKRPLEEGNGGHLCKLQLVWKKLSWSVAPKNALVQLHELRPGL
QYRTVSQTGPVHAPVFAVAVEVNGLTFEGTGPTKKKAKMRAAELALRSFVQFPNACQAHLAMGGGPGPGT
DFTSDQADFPDTLFQEFEPPAPRPGLAGGRPGDAALLSAAYGRRRLLCRALDLVGPTPATPAAPGERNPV
VLLNRLRAGLRYVCLAEPAERRARSFVMAVSVDGRTFEGSGRSKKLARGQAAQAALQELFDIQMPGHAPG
RARRTPMPQEFADSISQLVTQKFREVTTDLTPMHARHKALAGIVMTKGLDARQAQVVALSSGTKCISGEH
LSDQGLVVNDCHAEVVARRAFLHFLYTQLELHLSKRREDSERSIFVRLKEGGYRLRENILFHLYVSTSPC
GDARLHSPYEITTDLHSSKHLVRKFRGHLRTKIESGEGTVPVRGPSAVQTWDGVLLGEQLITMSCTDKIA
RWNVLGLQGALLSHFVEPVYLQSIVVGSLHHTGHLARVMSHRMEGVGQLPASYRHNRPLLSGVSDAEARQ
PGKSPPFSMNWVVGSADLEIINATTGRRSCGGPSRLCKHVLSARWARLYGRLSTRTPSPGDTPSMYCEAK
LGAHTYQSVKQQLFKAFQKAGLGTWVRKPPEQQQFLLTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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