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Report for CCDS677.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
677.1 |
Public |
Homo sapiens |
1 |
ZZZ3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:26009](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:677.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:26009](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 677.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000370801.8 |
ENSP00000359837.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000370801.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000359837.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000370801](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000359837](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376146.1 |
NP_001363075.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376146.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363075.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376146](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363075](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363075.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376147.1 |
NP_001363076.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376147.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363076.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376147](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363076](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363076.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_015534.6 |
NP_056349.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_015534.6](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_056349.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_015534](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_056349](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_056349.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 677.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2712 nt): ATGGCTGCTTCCCGATCTACTCGTGTTACAAGATCAACAGTGGGGTTAAACGGCTTGGATGAATCTTTTT GTGGTAGAACTTTAAGGAATCGTAGCATTGCGCATCCTGAAGAAATCTCTTCTAATTCTCAAGTACGATC AAGATCACCAAAGAAGAGACCAGAGCCTGTGCCAATTCAGAAAGGAAATAATAATGGGAGAACCACTGAT TTAAAACAGCAGAGTACCCGAGAATCATGGGTAAGCCCTAGGAAAAGAGGACTTTCTTCTTCAGAAAAGG ATAACATAGAAAGGCAGGCTATAGAAAATTGTGAGAGAAGGCAAACAGAACCTGTTTCACCAGTTTTAAA AAGAATTAAGCGTTGTCTTAGATCTGAAGCACCAAACAGTTCAGAAGAAGATTCTCCTATAAAATCAGAC AAGGAGTCAGTAGAACAGAGGAGTACAGTAGTGGACAATGATGCAGATTTTCAAGGGACTAAACGAGCTT GTCGATGTCTTATACTGGATGATTGTGAGAAAAGGGAAATTAAAAAGGTGAATGTCAGTGAGGAAGGGCC ACTTAATTCTGCAGTAGTTGAAGAAATCACAGGCTATTTGGCTGTCAATGGTGTTGATGACAGTGATTCA GCTGTTATAAACTGTGATGACTGTCAGCCTGATGGGAACACTAAACAAAATAGCATTGGTTCCTATGTGT TACAGGAAAAATCAGTAGCTGAAAATGGGGATACGGATACCCAAACTTCAATGTTCCTTGATAGTAGGAA GGAGGACAGTTATATAGACCATAAGGTGCCTTGCACAGATTCACAAGTGCAGGTCAAGTTGGAGGACCAC AAAATAGTAACTGCCTGCTTGCCTGTGGAACATGTTAATCAGCTGACTACTGAGCCAGCTACAGGGCCCT TTTCTGAAACTCAGTCATCTTTAAGGGATTCTGAGGAGGAAGTAGATGTGGTGGGAGATAGCAGTGCCTC AAAAGAGCAGTGTAAAGAAAACACCAATAACGAACTGGACACAAGTCTTGAGAGTATGCCAGCCTCCGGA GAACCTGAACCATCTCCTGTTCTAGACTGTGTTTCAGCTCAAATGATGTCTTTATCAGAACCTCAAGAAC ATCGTTATACTCTGAGAACCTCACCACGAAGGGCAGCCCCTACCAGAGGTAGTCCCACTAAAAACAGTTC TCCTTACAGAGAAAATGGACAATTTGAGGAGAATAATCTTAGTCCTAATGAAACAAATGCAACTGTTAGT GATAATGTAAGTCAATCTCCTACAAATCCTGGTGAAATTTCTCAAAATGAAAAAGGGATATGTTGTGACT CTCAAAATAATGGAAGTGAAGGAGTAAGTAAACCACCCTCAGAGGCAAGACTCAATATTGGACATTTGCC ATCTGCCAAAGAGAGTGCCAGTCAGCACATTACAGAAGAGGAAGATGATGATCCTGATGTTTATTACTTT GAATCAGATCATGTGGCACTGAAACACAACAAAGATTATCAGAGACTATTACAGACGATTGCTGTACTCG AGGCTCAGCGTTCTCAAGCAGTCCAAGACCTTGAAAGTTTAGGCAGGCACCAGAGAGAAGCACTGAAAAA TCCCATTGGATTTGTGGAAAAACTCCAGAAGAAGGCTGATATTGGGCTTCCATATCCACAGAGAGTTGTT CAATTGCCTGAGATCGTATGGGACCAATATACCCATAGCCTTGGGAATTTTGAAAGAGAATTTAAAAATC GTAAAAGACATACTAGAAGAGTTAAGCTAGTTTTTGATAAAGTAGGTTTACCTGCTAGACCAAAAAGTCC TTTAGATCCTAAGAAGGATGGAGAGTCCCTTTCATATTCTATGTTGCCTTTGAGTGATGGTCCAGAAGGC TCAAGCAGTCGTCCTCAGATGATAAGAGGACGCTTGTGTGATGATACCAAACCTGAAACATTTAACCAGT TGTGGACTGTTGAAGAACAGAAAAAGCTGGAACAGCTACTCATCAAATACCCTCCTGAAGAAGTAGAATC TCGACGCTGGCAGAAGATAGCAGATGAATTGGGCAACAGGACAGCAAAACAGGTTGCCAGCCGAGTACAG AAGTATTTCATAAAGCTAACTAAAGCTGGCATTCCAGTACCAGGCAGAACACCAAACTTATATATATACT CCAAAAAGTCTTCAACAAGCAGACGACAGCACCCTCTTAATAAGCATCTCTTTAAGCCTTCCACTTTCAT GACTTCACATGAACCGCCAGTGTATATGGATGAAGATGATGACCGATCTTGTTTTCATAGCCACATGAAC ACTGCTGTTGAAGATGCATCAGATGACGAAAGTATTCCTATCATGTATAGGAATTTACCTGAATATAAAG AACTATTACAGTTTAAAAAGTTAAAGAAGCAGAAACTTCAGCAAATGCAAGCTGAAAGTGGATTTGTGCA ACATGTGGGCTTTAAGTGTGATAACTGTGGCATAGAACCCATCCAGGGTGTTCGGTGGCATTGCCAGGAT TGTCCTCCAGAAATGTCTTTGGATTTCTGTGATTCTTGTTCAGACTGTCTACATGAAACAGATATTCACA AGGAAGATCACCAATTAGAACCTATTTATAGGTCAGAGACATTCTTAGACAGAGACTACTGTGTGTCTCA GGGCACCAGTTACAATTACCTTGACCCAAACTACTTTCCAGCAAACAGATGA
Translation (903 aa): MAASRSTRVTRSTVGLNGLDESFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQKGNNNGRTTD LKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIKSD KESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKVNVSEEGPLNSAVVEEITGYLAVNGVDDSDS AVINCDDCQPDGNTKQNSIGSYVLQEKSVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDH KIVTACLPVEHVNQLTTEPATGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASG EPEPSPVLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVS DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEEEDDDPDVYYF ESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIGFVEKLQKKADIGLPYPQRVV QLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDKVGLPARPKSPLDPKKDGESLSYSMLPLSDGPEG SSSRPQMIRGRLCDDTKPETFNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQ KYFIKLTKAGIPVPGRTPNLYIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMN TAVEDASDDESIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQD CPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYNYLDPNYFPANR
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