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Report for CCDS66944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66944.1 Public Homo sapiens 16 PRM2 24 110 108 CCDS HistoryNCBI Gene:5620Re-query CCDS DB by CCDS ID:66944.1Re-query CCDS DB by GeneID:5620See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66944.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435245.2 ENSP00000403681.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435245.2Link to Ensembl Protein Viewer:ENSP00000403681.2Re-query CCDS DB by Nucleotide ID:ENST00000435245Re-query CCDS DB by Protein ID:ENSP00000403681
Original member Current member NCBI NM_001286356.2 NP_001273285.1 Accepted alive Link to Nucleotide Sequence:NM_001286356.2Link to Protein Sequence:NP_001273285.1Re-query CCDS DB by Nucleotide ID:NM_001286356Re-query CCDS DB by Protein ID:NP_001273285Link to BLAST:NP_001273285.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273285.1 140 P04554-2 140 100% 0 0

Chromosomal Locations for CCDS 66944.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 11275830 11275981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 11276100 11276370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGGTCCGATACCGCGTGAGGAGCCTGAGCGAACGCTCGCACGAGGTGTACAGGCAGCAGTTGCATGGGC
AAGAGCAAGGACACCACGGCCAAGAGGAGCAAGGGCTGAGCCCGGAGCACGTCGAGGTCTACGAGAGGAC
CCATGGCCAGTCTCACTATAGGCGCAGACACTGCTCTCGAAGGAGGCTGCACCGGATCCACAGGCGGCAG
CATCGCTCCTGCAGAAGGCGCAAAAGACGCTCCTGCAGGCACCGGAGGAGGCATCGCAGAGAGTCCCTAG
GTGACCCCCTCAACCAGAACTTTCTTTCCCAAAAGGCTGCAGAACCAGGAAGAGAACATGCAGAAGGCAC
TAAGCTTCCTGGGCCCCTCACCCCCAGCTGGAAATTAAGAAAAAGTCGCCCGAAACACCAAGTGAGGCCA
TAG

Translation (140 aa):
MVRYRVRSLSERSHEVYRQQLHGQEQGHHGQEEQGLSPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQ
HRSCRRRKRRSCRHRRRHRRESLGDPLNQNFLSQKAAEPGREHAEGTKLPGPLTPSWKLRKSRPKHQVRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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