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Report for CCDS66886.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66886.1 Public Homo sapiens 16 NME4 24 110 108 CCDS HistoryNCBI Gene:4833Re-query CCDS DB by CCDS ID:66886.1Re-query CCDS DB by GeneID:4833See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66886.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397722.5 ENSP00000380834.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397722.5Link to Ensembl Protein Viewer:ENSP00000380834.1Re-query CCDS DB by Nucleotide ID:ENST00000397722Re-query CCDS DB by Protein ID:ENSP00000380834
Original member Current member EBI ENST00000450036.1 ENSP00000389048.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450036.1Link to Ensembl Protein Viewer:ENSP00000389048.1Re-query CCDS DB by Nucleotide ID:ENST00000450036Re-query CCDS DB by Protein ID:ENSP00000389048
Original member Current member EBI ENST00000620944.4 ENSP00000479996.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620944.4Link to Ensembl Protein Viewer:ENSP00000479996.1Re-query CCDS DB by Nucleotide ID:ENST00000620944Re-query CCDS DB by Protein ID:ENSP00000479996
Original member Current member NCBI NM_001286436.2 NP_001273365.1 Accepted alive Link to Nucleotide Sequence:NM_001286436.2Link to Protein Sequence:NP_001273365.1Re-query CCDS DB by Nucleotide ID:NM_001286436Re-query CCDS DB by Protein ID:NP_001273365Link to BLAST:NP_001273365.1
Original member Current member NCBI NM_001286438.2 NP_001273367.1 Accepted alive Link to Nucleotide Sequence:NM_001286438.2Link to Protein Sequence:NP_001273367.1Re-query CCDS DB by Nucleotide ID:NM_001286438Re-query CCDS DB by Protein ID:NP_001273367Link to BLAST:NP_001273367.1
Original member Current member NCBI NM_001286439.2 NP_001273368.1 Accepted alive Link to Nucleotide Sequence:NM_001286439.2Link to Protein Sequence:NP_001273368.1Re-query CCDS DB by Nucleotide ID:NM_001286439Re-query CCDS DB by Protein ID:NP_001273368Link to BLAST:NP_001273368.1
Original member Current member NCBI NM_001286440.2 NP_001273369.1 Accepted alive Link to Nucleotide Sequence:NM_001286440.2Link to Protein Sequence:NP_001273369.1Re-query CCDS DB by Nucleotide ID:NM_001286440Re-query CCDS DB by Protein ID:NP_001273369Link to BLAST:NP_001273369.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273365.1 117 O00746-2 117 100% 0 0
NP_001273367.1 117 O00746-2 117 100% 0 0
NP_001273368.1 117 O00746-2 117 100% 0 0
NP_001273369.1 117 O00746-2 117 100% 0 0

Chromosomal Locations for CCDS 66886.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 399109 399123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 399379 399480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 399627 399739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 400219 400342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (354 nt):
ATGAAGATGCTGCAGGCACCAGAGAGCGTCCTTGCCGAGCACTACCAGGACCTGCGGAGGAAGCCCTTCT
ACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCTGTGGTGGCCATGGTCTGGGAAGGGTACAATGTCGT
CCGCGCCTCGAGGGCCATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGTGAC
TTCAGCGTCCACATCAGCAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCAGCGGGAGATCC
AGCTGTGGTTCCAGAGCAGTGAGCTGGTGAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCACCCAGC
CTGA

Translation (117 aa):
MKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGD
FSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQHSSIHPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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