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Report for CCDS66876.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66876.1 Public Homo sapiens 15 LYSMD4 24 110 108 CCDS HistoryNCBI Gene:145748Re-query CCDS DB by CCDS ID:66876.1Re-query CCDS DB by GeneID:145748See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 66876.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332728.8 ENSP00000333008.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000332728.8Link to Ensembl Protein Viewer:ENSP00000333008.5Re-query CCDS DB by Nucleotide ID:ENST00000332728Re-query CCDS DB by Protein ID:ENSP00000333008
Original member Current member NCBI NM_001284421.2 NP_001271350.1 Accepted alive Link to Nucleotide Sequence:NM_001284421.2Link to Protein Sequence:NP_001271350.1Re-query CCDS DB by Nucleotide ID:NM_001284421Re-query CCDS DB by Protein ID:NP_001271350Link to BLAST:NP_001271350.1
Original member Current member NCBI NM_001284422.2 NP_001271351.1 Accepted alive Link to Nucleotide Sequence:NM_001284422.2Link to Protein Sequence:NP_001271351.1Re-query CCDS DB by Nucleotide ID:NM_001284422Re-query CCDS DB by Protein ID:NP_001271351Link to BLAST:NP_001271351.1

Chromosomal Locations for CCDS 66876.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99729123 99729635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (513 nt):
ATGGAGACCCACAAAGAACTGAAACCCCTTCTGAGCCCGTCTTCCGAGACCACAGTGACCGTGGAACTGC
CAGAGGCAGACAGAGCAGGCGCGGGCACCGGTGCCCAGGCCGGCCAACTGATGGGCTTCTTTAAGGGGAT
TGACCAGGATATTGAGCGTGCAGTGCAGTCAGAAATCTTTCTACATGAAAGTTACTGCATGGACACCTCC
CATCAGCCACTGCTCCCGGCACCTCCGAAGACGCCTATGGATGGTGCAGATTGTGGCATTCAGTGGTGGA
ATGCTGTTTTCATCATGCTGCTGATTGGTATTGTCTTGCCTGTCTTTTATTTGGTCTACTTTAAAATACA
AGCTAGTGGTGAGACCCCTAATAGCTTGAACACAACTGTCATCCCCAATGGCTCGATGGCAATGGGTACA
GTTCCAGGGCAAGCCCCCAGACTAGCAGTTGCAGTGCCAGCCGTCACTTCTGCAGACAGCCAGTTCAGTC
AGACCACCCAAGCGGGGAGCTAA

Translation (170 aa):
METHKELKPLLSPSSETTVTVELPEADRAGAGTGAQAGQLMGFFKGIDQDIERAVQSEIFLHESYCMDTS
HQPLLPAPPKTPMDGADCGIQWWNAVFIMLLIGIVLPVFYLVYFKIQASGETPNSLNTTVIPNGSMAMGT
VPGQAPRLAVAVPAVTSADSQFSQTTQAGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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