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Report for CCDS66281.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66281.1 Public Homo sapiens 12 PARP11 24 110 108 CCDS HistoryNCBI Gene:57097Re-query CCDS DB by CCDS ID:66281.1Re-query CCDS DB by GeneID:57097See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66281.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000427057.6 ENSP00000397058.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000427057.6Link to Ensembl Protein Viewer:ENSP00000397058.2Re-query CCDS DB by Nucleotide ID:ENST00000427057Re-query CCDS DB by Protein ID:ENSP00000397058
Original member Current member EBI ENST00000447133.7 ENSP00000405385.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447133.7Link to Ensembl Protein Viewer:ENSP00000405385.3Re-query CCDS DB by Nucleotide ID:ENST00000447133Re-query CCDS DB by Protein ID:ENSP00000405385
Original member Current member NCBI NM_001286521.2 NP_001273450.1 Accepted alive Link to Nucleotide Sequence:NM_001286521.2Link to Protein Sequence:NP_001273450.1Re-query CCDS DB by Nucleotide ID:NM_001286521Re-query CCDS DB by Protein ID:NP_001273450Link to BLAST:NP_001273450.1
Original member Current member NCBI NM_001286522.2 NP_001273451.1 Accepted alive Link to Nucleotide Sequence:NM_001286522.2Link to Protein Sequence:NP_001273451.1Re-query CCDS DB by Nucleotide ID:NM_001286522Re-query CCDS DB by Protein ID:NP_001273451Link to BLAST:NP_001273451.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273450.1 257 Q9NR21-2 257 100% 0 0
NP_001273451.1 257 Q9NR21-2 257 100% 0 0

Chromosomal Locations for CCDS 66281.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 3812123 3812439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 3814037 3814188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 3821873 3822003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 3822085 3822157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 3826158 3826233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 3829890 3829914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGTGGGAAGTGGCACATGTTTCAGAAATGAAGCAAATGAATCTCACCACTGGAAAGCAGCGCTTAATAA
AAAGAGCCCCCTTTTCTATCAGTGCTTTCAGTTACATCTGTGAAAACGAGGCCATCCCTATGCCACCACA
CTGGGAGAATGTGAATACTCAAGTACCATATCAGCTTATTCCTCTGCACAATCAAACACATGAATATAAT
GAAGTTGCTAATCTCTTTGGGAAGACGATGGATCGCAACCGAATTAAAAGAATTCAGAGAATTCAAAACC
TAGATTTGTGGGAGTTCTTTTGCAGGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGTGTGCCTCAGATTAA
TGAACAAATGCTGTTTCATGGTACCAGCAGTGAATTTGTGGAAGCAATCTGCATTCATAACTTTGATTGG
AGAATAAATGGTATACATGGTGCTGTCTTTGGAAAAGGAACCTATTTTGCTAGAGATGCTGCTTATTCCA
GTCGTTTCTGCAAAGATGACATAAAGCATGGGAACACATTCCAAATTCATGGTGTCAGCTTGCAACAGCG
GCATCTGTTTAGAACATATAAATCTATGTTTCTTGCTCGAGTGCTAATTGGAGATTACATAAACGGAGAC
TCCAAATACATGCGACCTCCTTCCAAAGACGGGAGCTATGTGAATTTATATGACAGCTGTGTGGATGATA
CCTGGAACCCAAAGATCTTTGTGGTTTTTGATGCCAACCAAATCTATCCTGAGTACTTGATAGACTTTCA
TTGA

Translation (257 aa):
MWEVAHVSEMKQMNLTTGKQRLIKRAPFSISAFSYICENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYN
EVANLFGKTMDRNRIKRIQRIQNLDLWEFFCRKKAQLKKKRGVPQINEQMLFHGTSSEFVEAICIHNFDW
RINGIHGAVFGKGTYFARDAAYSSRFCKDDIKHGNTFQIHGVSLQQRHLFRTYKSMFLARVLIGDYINGD
SKYMRPPSKDGSYVNLYDSCVDDTWNPKIFVVFDANQIYPEYLIDFH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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