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Report for CCDS64854.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64854.1 Public Homo sapiens 8 STMN4 24 110 108 CCDS HistoryNCBI Gene:81551Re-query CCDS DB by CCDS ID:64854.1Re-query CCDS DB by GeneID:81551See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64854.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523048.5 ENSP00000428428.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523048.5Link to Ensembl Protein Viewer:ENSP00000428428.1Re-query CCDS DB by Nucleotide ID:ENST00000523048Re-query CCDS DB by Protein ID:ENSP00000428428
Original member Current member NCBI NM_001283053.2 NP_001269982.1 Accepted alive Link to Nucleotide Sequence:NM_001283053.2Link to Protein Sequence:NP_001269982.1Re-query CCDS DB by Nucleotide ID:NM_001283053Re-query CCDS DB by Protein ID:NP_001269982Link to BLAST:NP_001269982.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269982.1 203 Q9H169-4 203 100% 0 0

Chromosomal Locations for CCDS 64854.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 27239259 27239279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 27239971 27240162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 27241054 27241262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 27241677 27241757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 27242397 27242492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 27243711 27243723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (612 nt):
ATGACCCTTGCTGCCTACAAAGAGAAGATGAAGGAGCTCCCGCTGGTGTCCTTGTTCTGCTCCTGCTTCC
TGGCCGATCCCCTGAATAAGTCGTCCTACAAATATGAAGGCTGGTGTGGGAGACAGTGTAGGAGGAAGGA
TGAAAGCCAGCGGAAAGACAGTGCTGACTGGAGAGAAAGAAGAGCTCAGGCAGACACGGTGGACCTGAAT
TGGTGCGTCATTTCCGACATGGAAGTCATCGAGCTGAACAAATGCACCTCGGGCCAATCCTTTGAAGTCA
TCCTGAAGCCACCCTCCTTTGATGGGGTTCCCGAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCATC
CCTGGAAGAGATCCAGAAGAAACTAGAAGCGGCTGAGGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCTG
AAACACCTAGCAGAGAAACGGGAACATGAGAGAGAGGTGATCCAAAAGGCCATTGAGGAAAACAACAACT
TCATCAAGATGGCTAAGGAAAAACTGGCCCAGAAGATGGAATCCAACAAGGAGAACAGGGAGGCCCACCT
CGCCGCCATGTTGGAACGGCTGCAAGAGAAGGAACCGCCTGCTGCGCGGTGA

Translation (203 aa):
MTLAAYKEKMKELPLVSLFCSCFLADPLNKSSYKYEGWCGRQCRRKDESQRKDSADWRERRAQADTVDLN
WCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELL
KHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKEPPAAR


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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