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Report for CCDS64284.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64284.1 Public Homo sapiens 5 JAKMIP2 24 110 108 CCDS HistoryNCBI Gene:9832Re-query CCDS DB by CCDS ID:64284.1Re-query CCDS DB by GeneID:9832See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64284.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333010.6 ENSP00000328989.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000333010.6Link to Ensembl Protein Viewer:ENSP00000328989.6Re-query CCDS DB by Nucleotide ID:ENST00000333010Re-query CCDS DB by Protein ID:ENSP00000328989
Original member Current member NCBI NM_001282282.2 NP_001269211.1 Accepted alive Link to Nucleotide Sequence:NM_001282282.2Link to Protein Sequence:NP_001269211.1Re-query CCDS DB by Nucleotide ID:NM_001282282Re-query CCDS DB by Protein ID:NP_001269211Link to BLAST:NP_001269211.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269211.1 778 Q96AA8-4 778 100% 0 0

Chromosomal Locations for CCDS 64284.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 147601761 147601811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147612306 147612371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147617911 147618114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147620666 147620743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147623621 147623689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147628751 147628816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147629693 147629746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147631413 147631511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147632680 147632778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147636222 147636284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147636965 147637048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147639632 147639760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147640704 147640823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147641708 147641764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147644058 147644198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147644850 147644996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147648376 147648474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147650338 147650547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147660948 147661445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 147782456 147782458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2337 nt):
ATGGTATCAAAGCTTGAAAGAGAGAAGACTCAAGAAGCGAAGAGGATTCGTGAGCTGGAGCAGCGCAAGC
ACACGGTGCTGGTGACAGAACTCAAAGCCAAGCTCCATGAGGAGAAGATGAAGGAGCTGCAGGCTGTGAG
GGAGAACCTTATCAAGCAGCACGAGCAGGAAATGTCAAGGACGGTGAAGGTACGTGATGGAGAGATCCAG
AGGCTCAAGTCTGCTCTCTGTGCTCTCCGCGACGGCAGCAGTGACAAAGTAAGGACAGCGCTCACCATTG
AGGCCCGGGAGGAGGCCCGGAAACTGTTTGACACAGAGCGCCTTAAGCTCTTACAGGAAATTGCGGACCT
GAAAACGGCCAAGAAGCAGGTGGACGAGGCTCTGAGCAATATGATCCAAGCAGATAAAATCAAGGCTGGG
GACCTTCGGAGTGAGCATCAGTCCCACCAAGAAGCCATCTCGAAGATCAAGTGGGAGTCGGAGCGGGATA
TTCGGAGGCTGATGGATGAAATCAAAGCCAAGGACAGGATCATCTTTTCCCTGGAAAAGGAACTGGAGAC
CCAGACAGGCTATGTACAGAAACTCCAACTTCAGAAGGAGGCTTTGGACGAACAACTCTTTCTGGTCAAG
GAGGCTGAGTGCAACATGAGCAGCCCAAAACGAGAAATTCCAGGAAGGGCAGGTGATGGTTCCGAACACT
GCAGCAGTCCTGATTTGCGAAGAAATCAAAAGAGAATAGCTGAATTGAATGCCACTATAAGAAAATTAGA
AGACAGGAATACCTTGCTTGGAGATGAACGAAATGAACTGTTAAAACGTGTGCGGGAAACCGAAAAGCAA
TGTAAACCTCTCCTGGAAAGGAACAAGTGCCTCGCCAAGAGAAACGATGAACTGATGGTGTCCTTGCAGC
GCATGGAAGAAAAACTAAAAGCCGTTACCAAGGAAAATTCAGAAATGAGAGAAAAAATAACATCCCATCC
ACCCCTGAAGAAATTAAAATCTCTGAATGACCTCGACCAAGCTAATGAAGAACAAGAAACAGAGTTTCTA
AAACTTCAGGTCATTGAGCAACAGAACATTATTGATGAGCTCACAAGGGACCGAGAAAAGCTCATCCGTA
GAAGAAAGCATAGAAGAAGTTCCAAGCCAATTAAGAGGCCTGTTTTGGACCCGTTTATTGGCTATGATGA
GGACTCTATGGATTCAGAGACATCATCCATGGCCTCATTTAGAACAGACAGAACACCAGCTACTCCTGAT
GATGACTTGGATGAAAGTTTAGCAGCTGAAGAATCTGAACTAAGATTTCGACAATTAACAAAAGAATATC
AGGCCCTCCAAAGAGCATATGCCCTCCTACAGGAGCAGACGGGAGGCATCATCGACGCTGAACGAGAAGC
CAAGGCTCAAGAACAGCTCCAAGCAGAGGTGCTAAGGTATAAAGCCAAAATTGAAGACCTGGAAGCGACT
CTGGCTCAGAAAGGGCAGGATTCACACTGGGTAGAAGATAAACAACTTTTCATTAAGAGAAACCAGGAGC
TTTTAGAAAAGATAGAAAAACAGGAGGCAGAAAATCACCGGTTACAACAAGAACTACAGGACGCCAGAGA
CCAGAATGAGCTGCTGGAGTTTCGAAACCTAGAGCTAGAAGAGAGAGAGAGACGATCCCCTCCATTTAAT
CTCCAAATTCACCCATTCTCAGATGGTGTGAGTGCTCTACAGATCTACTGTATGAAAGAAGGTGTTAAGG
ATGTGAACATCCCTGATCTCATAAAGCAGCTTGATATCTTGGGTGATAATGGGAATTTAAGAAATGAAGA
ACAAGTGGCCATAATTCAGGCCAGCACTGTGCTGTCCCTGGCAGAGAAGTGGATCCAGCAGATTGAAGGA
GCTGAGGCTGCCCTACACCAGAAAATGATGGAATTGGAAAGTGACATGGAACAGTTCTGCAAAATAAAAG
GCTATCTGGAGGAAGAACTAGACTACAGAAAACAAGCTCTTGACCAAGCATATATGAGAATCCAGGAACT
AGAAGCTACTTTGTACAATGCTCTACAGCAAGAAACTGTTATCAAGTTTGGTGAATTATTAAGTGAAAAA
CAGCAAGAGGAGCTGAGGACGGCAGTAGAAAAGTTACGGCGGCAAATGCTGAGGAAGAGCAGAGAGTATG
ACTGTCAGATTCTTCAGGAGAGAATGGAGCTCTTACAGCAAGCCCATCAGAGAATTCGTGACTTAGAAGA
TAAAACAGACATCCAGAAAAGACAAATAAAAGACTTAGAAGAAAAGTTTCTGTTTCTATTCTTGTTCTTC
TCTCTTGCCTTTATTCTATGGCCTTGA

Translation (778 aa):
MVSKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQEMSRTVKVRDGEIQ
RLKSALCALRDGSSDKVRTALTIEAREEARKLFDTERLKLLQEIADLKTAKKQVDEALSNMIQADKIKAG
DLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDRIIFSLEKELETQTGYVQKLQLQKEALDEQLFLVK
EAECNMSSPKREIPGRAGDGSEHCSSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQ
CKPLLERNKCLAKRNDELMVSLQRMEEKLKAVTKENSEMREKITSHPPLKKLKSLNDLDQANEEQETEFL
KLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMASFRTDRTPATPD
DDLDESLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAEREAKAQEQLQAEVLRYKAKIEDLEAT
LAQKGQDSHWVEDKQLFIKRNQELLEKIEKQEAENHRLQQELQDARDQNELLEFRNLELEERERRSPPFN
LQIHPFSDGVSALQIYCMKEGVKDVNIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEG
AEAALHQKMMELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLSEK
QQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQIKDLEEKFLFLFLFF
SLAFILWP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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