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Report for CCDS63877.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63877.1 Public Homo sapiens 3 MUC20 24 110 108 CCDS HistoryNCBI Gene:200958Re-query CCDS DB by CCDS ID:63877.1Re-query CCDS DB by GeneID:200958See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63877.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447234.7 ENSP00000414350.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000447234.7Link to Ensembl Protein Viewer:ENSP00000414350.2Re-query CCDS DB by Nucleotide ID:ENST00000447234Re-query CCDS DB by Protein ID:ENSP00000414350
Original member Current member NCBI NM_001282506.2 NP_001269435.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001282506.2Link to Protein Sequence:NP_001269435.1Re-query CCDS DB by Nucleotide ID:NM_001282506Re-query CCDS DB by Protein ID:NP_001269435Link to BLAST:NP_001269435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269435.1 709 Q8N307-1 709 100% 0 0

Chromosomal Locations for CCDS 63877.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 195721008 195721083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195724680 195726572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195729648 195729739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 195733150 195733218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2130 nt):
ATGGGCTGTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCTTCTGCTGGGAGGTTGGGGTCTCTGGGAGCT
CTGCAGGCCCCAGCACCCGCAGAGCAGACACTGCGATGACAACGGACGACACAGAAGTGCCCGCTATGAC
TCTAGCACCGGGCCACGCCGCTCTGGAAACTCAAACGCTGAGCGCTGAGACCTCTTCTAGGGCCTCAACC
CCAGCCGGCCCCATTCCAGAAGCAGAGACCAGGGGAGCCAAGAGAATTTCCCCTGCAAGAGAGACCAGGA
GTTTCACAAAAACATCTCCCAACTTCATGGTGCTGATCGCCACCTCCGTGGAGACATCAGCCGCCAGTGG
CAGCCCCGAGGGAGCTGGAATGACCACAGTTCAGACCATCACAGGCAGTGATCCCAGGGAAGCCATCTTT
GACACCCTTTGCACCGATGACAGCTCTGAAGAGGCAAAGACACTCACAATGGACATATTGACATTGGCTC
ACACCTCCACAGAAGCTAAGGGCCTGTCCTCAGAGAGCAGCGCCTCTTCCGACAGCCCCCATCCAGTCAT
CACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGG
GCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCA
GCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGA
CGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCA
GTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGT
CACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGA
GAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCT
TCCGACGGCCTCCATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCC
ATCCAGTCATCACCCCGTCACGGGCCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCAC
CCCCTCATGGTCCCCGGGATCTGACGTCACTCTCCTCGCTGAAGCCCTGGTGACTGTCACAAACATCGAG
GTTATTAATTGCAGCATCACAGAAATAGAAACAACGACTTCCAGCATCCCTGGGGCCTCAGACACAGATC
TCATCCCCACGGAAGGGGTGAAGGCCTCGTCCACCTCCGATCCACCAGCTCTGCCTGACTCCACTGAAGC
AAAACCACACATCACTGAGGTCACAGCCTCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAGCT
GCACCTGATGCCACGGTTGGGACCCCACTCCCCACTAACAGCGCCACAGAAAGAGAAGTGACAGCACCCG
GGGCCACGACCCTCAGTGGAGCTCTGGTCACAGTTAGCAGGAATCCCCTTGAAGAAACCTCAGCCCTCTC
TGTTGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCCGGTCTCCATAGAGGCTGGGTCAGCAGTG
GGCAAAACAACTTCCTTTGCTGGGAGCTCTGCTTCCTCCTACAGCCCCTCGGAAGCCGCCCTCAAGAACT
TCACCCCTTCAGAGACACCGACCATGGACATCGCAACCAAGGGGCCCTTCCCCACCAGCAGGGACCCTCT
TCCTTCTGTCCCTCCGACTACAACCAACAGCAGCCGAGGGACGAACAGCACCTTAGCCAAGATCACAACC
TCAGCGAAGACCACGATGAAGCCCCCAACAGCCACGCCCACGACTGCCCGGACGAGGCCGACCACAGACG
TGAGTGCAGGTGAAAATGGAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCTTCCCCGGAAGACCTCACTGA
CCCCAGAGTGGCAGAAAGGCTGATGCAGCAGCTCCACCGGGAACTCCACGCCCACGCGCCTCACTTCCAG
GTCTCCTTACTGCGTGTCAGGAGAGGCTAA

Translation (709 aa):
MGCLWGLALPLFFFCWEVGVSGSSAGPSTRRADTAMTTDDTEVPAMTLAPGHAALETQTLSAETSSRAST
PAGPIPEAETRGAKRISPARETRSFTKTSPNFMVLIATSVETSAASGSPEGAGMTTVQTITGSDPREAIF
DTLCTDDSSEEAKTLTMDILTLAHTSTEAKGLSSESSASSDSPHPVITPSRASESSASSDGPHPVITPSR
ASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHP
VITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSAS
SDGLHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSWSPGSDVTLLAEALVTVTNIE
VINCSITEIETTTSSIPGASDTDLIPTEGVKASSTSDPPALPDSTEAKPHITEVTASAETLSTAGTTESA
APDATVGTPLPTNSATEREVTAPGATTLSGALVTVSRNPLEETSALSVETPSYVKVSGAAPVSIEAGSAV
GKTTSFAGSSASSYSPSEAALKNFTPSETPTMDIATKGPFPTSRDPLPSVPPTTTNSSRGTNSTLAKITT
SAKTTMKPPTATPTTARTRPTTDVSAGENGGFLLLRLSVASPEDLTDPRVAERLMQQLHRELHAHAPHFQ
VSLLRVRRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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