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Report for CCDS6386.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6386.1 Public Homo sapiens 8 THEM6 24 110 108 CCDS HistoryNCBI Gene:51337Re-query CCDS DB by CCDS ID:6386.1Re-query CCDS DB by GeneID:51337See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6386.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336138.4 ENSP00000338607.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336138.4Link to Ensembl Protein Viewer:ENSP00000338607.3Re-query CCDS DB by Nucleotide ID:ENST00000336138Re-query CCDS DB by Protein ID:ENSP00000338607
Original member Current member NCBI NM_016647.3 NP_057731.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016647.3Link to Protein Sequence:NP_057731.1Re-query CCDS DB by Nucleotide ID:NM_016647Re-query CCDS DB by Protein ID:NP_057731Link to BLAST:NP_057731.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057731.1 208 Q8WUY1 208 100% 0 0

Chromosomal Locations for CCDS 6386.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 142727347 142727859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 142735326 142735439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGCTGGGGCTGCTGGTGGCGTTGCTGGCCCTGGGGCTCGCTGTCTTTGCGCTGCTGGACGTCTGGTACC
TGGTGCGCCTTCCGTGCGCCGTGCTGCGCGCGCGCCTGCTGCAGCCGCGCGTCCGTGACCTGCTAGCTGA
GCAGCGCTTCCCGGGCCGCGTGCTGCCCTCGGACTTGGACCTGCTGCTGCACATGAACAACGCGCGCTAC
CTGCGCGAGGCCGACTTTGCGCGCGTCGCGCACCTGACCCGCTGCGGGGTGCTCGGGGCGCTGAGGGAGT
TGCGGGCGCACACGGTGCTGGCGGCCTCGTGCGCGCGCCACCGCCGCTCGCTGCGCCTGCTGGAGCCCTT
CGAGGTGCGCACCCGCCTGCTGGGCTGGGACGACCGCGCGTTCTACCTGGAGGCGCGCTTTGTCAGCCTG
CGGGACGGCTTCGTGTGCGCGCTGCTGCGCTTCCGGCAGCACCTGCTGGGCACCTCACCCGAGCGCGTCG
TGCAGCACCTGTGCCAGCGCAGGGTGGAGCCCCCTGAGCTGCCCGCTGATCTGCAGCACTGGATCTCCTA
CAACGAGGCCAGCAGCCAGCTGCTCCGCATGGAGAGTGGGCTCAGTGATGTCACCAAGGACCAGTGA

Translation (208 aa):
MLGLLVALLALGLAVFALLDVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLLHMNNARY
LREADFARVAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFVSL
RDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWISYNEASSQLLRMESGLSDVTKDQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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