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Report for CCDS62865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62865.1 Public Homo sapiens 2 LDAH 24 110 108 CCDS HistoryNCBI Gene:60526Re-query CCDS DB by CCDS ID:62865.1Re-query CCDS DB by GeneID:60526See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62865.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000626491.2 ENSP00000487592.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000626491.2Link to Ensembl Protein Viewer:ENSP00000487592.1Re-query CCDS DB by Nucleotide ID:ENST00000626491Re-query CCDS DB by Protein ID:ENSP00000487592
Original member Current member NCBI NM_001282720.2 NP_001269649.1 Accepted alive Link to Nucleotide Sequence:NM_001282720.2Link to Protein Sequence:NP_001269649.1Re-query CCDS DB by Nucleotide ID:NM_001282720Re-query CCDS DB by Protein ID:NP_001269649Link to BLAST:NP_001269649.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269649.1 277 Q9H6V9-3 277 100% 0 0

Chromosomal Locations for CCDS 62865.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 20686903 20687094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20701570 20701652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20739971 20740205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20774810 20774979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 20801310 20801463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGGACTCAGAACTCAAGGAAGAAATTCCTGTGCATGAGGAATTCATTTTGTGTGGTGGAGCCGAAACCC
AGGTTCTAAAATGTGGGCCCTGGACAGACCTCTTTCATGATCAAAGTGTCAAAAGGCCTAAGCTGCTTAT
TTTCATTATTCCTGATTCAAACGCTCAAGAAATTAAGGACATTTATGGACTAAATGGACAAATAGAGCAC
AAACTAGCTTTCCTGAGAACTCATGTGCCAAAGGACATGAAACTTGTGCTCATTGGCCATTCAATAGGCA
GCTATTTCACACTTCAGATGCTGAAGCGAGTCCCTGAGCTCCCGGTAATTCGTGCCTTTCTGCTCTTTCC
AACAATTGAACGAATGTCTGAGTCACCCAATGGCAGAATTGCCACTCCACTTTTGTGCTGGTTTCGATAT
GTTCTCTATGTTACTGGCTACTTATTATTGAAACCGTGTCCTGAGACAATCAAGTCCTTGCTAATCAGAA
GGGGCCTTCAAGTAATGAACCTAGAGAATGAATTTTCACCATTGAATATATTAGAACCATTCTGCCTTGC
TAATGCTGCCTACCTTGGGGGCCAAGAAATGATGGAGGTGGTGAAGAGAGATGACGAAACCATAAAGGAG
CATTTATGTAAGCTTACATTTTATTATGGTACTATAGATCCTTGGTGTCCAAAAGAGTACTATGAAGACA
TTAAGAAGGATTTTCCAGAAGGAGACATTCGACTCTGTGAGAAAAACATACCTCATGCTTTCATCACCCA
TTTTAACCAGGAAATGGCAGACATGATTGCTGACTCCCTAAAGGATGACTTGTCCAAAATGTAA

Translation (277 aa):
MDSELKEEIPVHEEFILCGGAETQVLKCGPWTDLFHDQSVKRPKLLIFIIPDSNAQEIKDIYGLNGQIEH
KLAFLRTHVPKDMKLVLIGHSIGSYFTLQMLKRVPELPVIRAFLLFPTIERMSESPNGRIATPLLCWFRY
VLYVTGYLLLKPCPETIKSLLIRRGLQVMNLENEFSPLNILEPFCLANAAYLGGQEMMEVVKRDDETIKE
HLCKLTFYYGTIDPWCPKEYYEDIKKDFPEGDIRLCEKNIPHAFITHFNQEMADMIADSLKDDLSKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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