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Report for CCDS61738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61738.1 Public Homo sapiens 15 FSD2 24 110 108 CCDS HistoryNCBI Gene:123722Re-query CCDS DB by CCDS ID:61738.1Re-query CCDS DB by GeneID:123722See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541889.1 ENSP00000444078.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541889.1Link to Ensembl Protein Viewer:ENSP00000444078.1Re-query CCDS DB by Nucleotide ID:ENST00000541889Re-query CCDS DB by Protein ID:ENSP00000444078
Original member Current member NCBI NM_001281805.2 NP_001268734.1 Accepted alive Link to Nucleotide Sequence:NM_001281805.2Link to Protein Sequence:NP_001268734.1Re-query CCDS DB by Nucleotide ID:NM_001281805Re-query CCDS DB by Protein ID:NP_001268734Link to BLAST:NP_001268734.1
Original member Current member NCBI NM_001281806.2 NP_001268735.1 Accepted alive Link to Nucleotide Sequence:NM_001281806.2Link to Protein Sequence:NP_001268735.1Re-query CCDS DB by Nucleotide ID:NM_001281806Re-query CCDS DB by Protein ID:NP_001268735Link to BLAST:NP_001268735.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268734.1 704 A1L4K1-2 704 100% 0 0
NP_001268735.1 704 A1L4K1-2 704 100% 0 0

Chromosomal Locations for CCDS 61738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82759348 82759600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82762102 82762278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82765166 82765298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82765898 82766031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82768880 82769030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82772073 82772228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82778766 82778887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82780245 82780267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82782795 82783025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82786511 82786606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82786752 82787390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2115 nt):
ATGGAGGAGGAATCGGGGGAGGAACTGGGGCTGGACAGGTCTACTCCCAAGGATTTCCACTTTTACCACA
TGGACCTGTATGACTCTGAAGACAGACTGCACCTCTTTCCAGAAGAGAACACTAGGATGAGGAAAGTAGT
CCAAGCTGAAATGGCCAATGAGTCAAGAGGAGCAGGGGATGGTAAGGCTCAAAGAGACCTTCAAGAGGAA
GTGGATGAACTTGTCCACTTATATGGACTTGAAGATGATCATGAATTAGGGGATGAGTTTGTTGATGAAA
ACATACCCAGAACAGGGGTTTCAGAATATCCTCCTTATATGATGAAGAGGAGAGACCCAGCCAGGGAGCA
GAGAGACTGGAGACTTAGTGGAGAGGCAGCGGAGGCCGAGGACCTGGGCTTCGGAGGGTGGGGCTCAGCA
GGCCAGTGCCAGGACTTGCGGGAAGCCTATAGGTACACACACGGCCGTGCCAGCGAGGAGTATGAATGCT
ATGTCATCCCCGAGGAAGAGGATGAAGAAGAAGCTGCTGATGTCTTCTGTGTCACTTGTAAGACTCCAAT
AAGAGCTTTTCAGAAGGTTTTTGATGAACATAAGGAGCATGAAGTGATCCCACTCAATGAAGCACTGGAA
AGTGCCAAGGATGAAATTCACAAAAACATGTACAAATTGGAAAAGCAGATAATTGAGATGGAAAACTTTG
CAAATCATTTGGAGGAGGTTTTCATCACTGTGGAGGAGAATTTTGGAAAACAAGAACAAAACTTTGAGTC
ACATTACAACGAGATCTTGGAAACACTTGCTCAAAAATATGAGGAAAAAATACAAGCTCTAGGGGAGAAA
AAGAAAGAGAAGCTGGAAGCCTTATATGGACAACTGGTCAGCTGTGGAGAAAACCTAGATACTTGCAAAG
AACTGATGGAAACAATAGAGGAGATGTGTCACGAGGAGAAGGTGGATTTCATAAAGGATGCAGTGGCTAT
GGCTGACAGACTCGGGAAATTCCTGAAAACAAAAACAGACGTGGAAATCTCTGCACAGCCTGAGTTTGAA
GACCAGACCTTGGATTTCTCTGATGTGGAGCAGCTGATGGGCTCCATTAACACCATTCCAGCTCCTTCTG
CTCCAGTCATAAATCCACAGGTCCCTAACTCAGCCACAGGTTCCTCAGTCCGAGTGTGCTGGAGCTTATA
CTCCGACGACACTGTGGAGAGCTATCAGCTGTCCTACCGGCCAGTGCAGGACAGCTCACCTGGGACGGAC
CAAGCAGCACCTTCTCCCCCCATTATTAAAACCAAAGAGATAAGGAGCTGTGAAGAGGCTGTGCTGATTT
GCTGGGAGTCTGGGAACCTGAATCCTGTGGACTCGTACACTGTGGAGCTGACCCAGGCTGAAAGTCCAGA
AGCCTCGGGTGTAACTGAGTCTGTTGTGGGCATCCCGACCTGCGAGTCCGTGGTGCAGCTGCAGCCGGGG
CGGAGCTACATTATCTATGTGCGAGCCCTCAATATGGGGGGCCCCAGCGTGAGGAGCGAGCCAGCTACAG
TCCACACCATAGGAAGCTACTTTCGCCTAAACAAGGACACTTGCCATCCCTGGCTGACCATTTCTGAAGA
CGGACTTACGGCTGTACGAAGTGAAAGGAGAACCCCCGCCAGGGAGCTGTCACCCAGCGACACTCACTTC
ACCAGGTGTGTTGCTGTCATGGGAAATCTAATTCCAGTCCGAGGGCACCATTACTGGGAGGTGGAGGTGG
ATGAGCATTTGGACTACAGAGTTGGTGTGGCCTTTGCAGATGTCCGTAAACAGGAGGATCTGGGAGCAAA
TTGCCTCTCCTGGTGCATGAGGCACACATTTGCATCATCAAGGCATAAGTATGAATTTCTGCACAACAGA
ACAACTCCAGATATAAGAATAACAGTTCCACCAAAGAAGATTGGCATTCTATTAGACTATGAACATTCAA
AGTTGTCATTTTTCAATGTGGACCTTTCTCAGCATCTATATACATTTAGTTGTCAGCTTCACGAATTTGT
GCATCCCTGTTTTTCTTTGGAAAAGCCTGGGTGTCTAAAGGTACATAATGGCATTTCAATGCCAAAACAT
GTCACTTTCTATTAG

Translation (704 aa):
MEEESGEELGLDRSTPKDFHFYHMDLYDSEDRLHLFPEENTRMRKVVQAEMANESRGAGDGKAQRDLQEE
VDELVHLYGLEDDHELGDEFVDENIPRTGVSEYPPYMMKRRDPAREQRDWRLSGEAAEAEDLGFGGWGSA
GQCQDLREAYRYTHGRASEEYECYVIPEEEDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLNEALE
SAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEK
KKEKLEALYGQLVSCGENLDTCKELMETIEEMCHEEKVDFIKDAVAMADRLGKFLKTKTDVEISAQPEFE
DQTLDFSDVEQLMGSINTIPAPSAPVINPQVPNSATGSSVRVCWSLYSDDTVESYQLSYRPVQDSSPGTD
QAAPSPPIIKTKEIRSCEEAVLICWESGNLNPVDSYTVELTQAESPEASGVTESVVGIPTCESVVQLQPG
RSYIIYVRALNMGGPSVRSEPATVHTIGSYFRLNKDTCHPWLTISEDGLTAVRSERRTPARELSPSDTHF
TRCVAVMGNLIPVRGHHYWEVEVDEHLDYRVGVAFADVRKQEDLGANCLSWCMRHTFASSRHKYEFLHNR
TTPDIRITVPPKKIGILLDYEHSKLSFFNVDLSQHLYTFSCQLHEFVHPCFSLEKPGCLKVHNGISMPKH
VTFY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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