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Report for CCDS60505.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60505.1 Public Homo sapiens 10 KIAA1217 24 110 108 CCDS HistoryNCBI Gene:56243Re-query CCDS DB by CCDS ID:60505.1Re-query CCDS DB by GeneID:56243See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60505.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396446.5 ENSP00000379723.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396446.5Link to Ensembl Protein Viewer:ENSP00000379723.1Re-query CCDS DB by Nucleotide ID:ENST00000396446Re-query CCDS DB by Protein ID:ENSP00000379723
Original member Current member NCBI NM_001282770.2 NP_001269699.1 Accepted alive Link to Nucleotide Sequence:NM_001282770.2Link to Protein Sequence:NP_001269699.1Re-query CCDS DB by Nucleotide ID:NM_001282770Re-query CCDS DB by Protein ID:NP_001269699Link to BLAST:NP_001269699.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269699.1 866 Q5T5P2-4 866 100% 0 0

Chromosomal Locations for CCDS 60505.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 24473228 24474060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24495147 24495196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24501379 24501545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24513259 24513434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24520123 24520253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24521782 24521929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24524323 24524764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24527936 24528119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24531830 24531993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24533070 24533237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 24544981 24545118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2601 nt):
ATGCAGAGAGAACTTGTTTATGCAAGAGGAGATGGCCCTGGGGCCCCTCGCCCCGGATCTACTGCTCATC
CACCCCATGCGATTCCAAATTCCCCACCGTCTACTCCAGTGCCCCATTCCATGCCCCCCTCCCCGTCCAG
AATTCCTTATGGGGGCACCCGCTCCATGGTTGTTCCTGGCAATGCCACCATCCCCAGGGACAGAATCTCC
AGCCTGCCAGTCTCCAGACCCATCTCTCCAAGCCCAAGCGCCATTTTAGAAAGAAGAGATGTCAAGCCTG
ATGAAGACATGAGTGGCAAAAACATTGCAATGTACAGAAATGAGGGTTTCTATGCTGATCCTTACCTTTA
TCACGAGGGACGGATGAGCATAGCCTCATCCCATGGTGGACACCCACTGGATGTCCCCGACCACATCATT
GCATATCACCGCACCGCCATCCGGTCAGCGAGTGCTTATTGTAACCCCTCAATGCAAGCGGAAATGCATA
TGGAACAATCACTGTACAGACAGAAATCAAGGAAATATCCGGATAGCCATTTGCCTACACTGGGCTCCAA
AACACCCCCTGCCTCTCCTCACAGAGTCAGTGACCTGAGGATGATAGACATGCACGCTCACTATAATGCC
CACGGCCCCCCTCACACCATGCAGCCAGACCGGGCCTCTCCGAGCCGCCAGGCCTTTAAAAAGGAGCCAG
GCACCTTGGTGTATATAGAAAAGCCACGGAGCGCTGCAGGATTATCCAGCCTTGTAGACCTCGGCCCTCC
TCTAATGGAGAAGCAAGTTTTTGCCTACAGCACGGCGACAATACCCAAAGACAGAGAGACCAGCGAGAAA
ATGATGAAAACCACAGCCAACAGGAACCACACAGATAGTGCAGGAACGCCCCATGTGTCTGGTGGGAAGA
TGCTCAGTGCTCTGGAGTCCACGGTGCCTCCCAGCCAGCCTCCACCTGTGGGCACCTCAGCCATCCACAT
GAGCCTGCTTGAGATGAGGCGGAGCGTGGCGGAACTCAGGCTCCAGCTCCAGCAGATGCGGCAGCTCCAG
CTGCAGAACCAGGAGTTGCTGAGGGCAATGATGAAGAAGGCCGAGCTGGAAATCAGTGGCAAAGTGATGG
AAACAATGAAGAGACTGGAGGATCCCGTGCAGCGACAGCGCGTCCTAGTGGAGCAAGAGAGACAAAAATA
TCTTCATGAGGAAGAGAAGATCGTCAAGAAGTTGTGCGAGTTGGAAGACTTTGTTGAAGACTTGAAGAAG
GACTCCACGGCAGCCAGCCGATTGGTTACTCTGAAAGACGTGGAAGACGGGGCTTTCCTCCTGCGTCAAG
TGGGAGAGGCTGTAGCTACCCTGAAAGGAGAATTTCCAACCTTACAAAACAAGATGCGAGCCATCCTGCG
CATAGAAGTGGAGGCCGTGCGGTTTCTGAAGGAGGAGCCACACAAGCTGGACAGTCTCCTGAAGCGTGTG
CGCAGCATGACAGACGTCCTGACCATGCTGCGGAGACATGTCACTGATGGGCTCCTGAAAGGCACGGACG
CAGCCCAAGCCGCACAGTACATGGCTATGGAAAAGGCCACAGCCGCAGAAGTCCTGAAGAGTCAGGAGGA
GGCAGCCCACACCTCCGGCCAGCCCTTCCACAGCACAGGTGCCCCTGGCGATGCGAAGTCGGAAGTGGTG
CCTTTGTCCGGCATGATGGTTCGCCACGCGCAGAGCTCCCCTGTGGTCATCCAGCCCTCCCAGCACTCCG
TGGCCCTGCTGAACCCTGCTCAGAACTTGCCTCACGTGGCCAGCTCCCCAGCCGTCCCCCAGGAAGCAAC
CTCCACTCTGCAGATGTCGCAGGCTCCGCAGTCCCCACAGATACCCATGAATGGGTCTGCCATGCAGAGC
TTGTTCATTGAAGAAATCCACAGTGTGAGTGCCAAGAACAGGGCAGTGTCTATCGAGAAAGCAGAAAAGA
AATGGGAGGAAAAAAGGCAAAATCTGGATCACTATAATGGGAAAGAGTTTGAGAAGCTCCTAGAAGAAGC
TCAGGCCAATATCATGAAGTCAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAAGGGGA
GATGCCCCAGTGGACAAGGTGGAACTTTCAGAAGATTCTCCAAATTCGGAACAGGACTTGGAAAAGCTGG
GGGGAAAGTCGCCCCCTCCTCCTCCGCCACCTCCTCGTCGAAGCTACCTGCCAGGATCGGGACTCACCAC
CACGAGGTCAGGCGATGTGGTCTACACCGGCAGAAAGGAGAACATCACCGCTAAGGCAAGCAGTGAAGAT
GCTGGACCAAGCCCACAGACCAGAGCTACAAAATATCCAGCAGAGGAGCCTGCTTCAGCCTGGACCCCAT
CCCCACCGCCTGTCACCACCTCCTCCTCAAAGGATGAGGAGGAAGAAGAAGAAGAAGGAGACAAAATAAT
GGCAGAACTCCAGGGCTCCAGCGGGGCCCCACAGACGAGCAGGATGCCTGTCCCCATGAGTGCCAAGAAC
AGACCCGGAACCCTGGACAAACCCGGCAAGCAGTCCAAACTGCAGGATCCCCGCCAATATCGTCAGGTAG
TTTTACCTTAA

Translation (866 aa):
MQRELVYARGDGPGAPRPGSTAHPPHAIPNSPPSTPVPHSMPPSPSRIPYGGTRSMVVPGNATIPRDRIS
SLPVSRPISPSPSAILERRDVKPDEDMSGKNIAMYRNEGFYADPYLYHEGRMSIASSHGGHPLDVPDHII
AYHRTAIRSASAYCNPSMQAEMHMEQSLYRQKSRKYPDSHLPTLGSKTPPASPHRVSDLRMIDMHAHYNA
HGPPHTMQPDRASPSRQAFKKEPGTLVYIEKPRSAAGLSSLVDLGPPLMEKQVFAYSTATIPKDRETSEK
MMKTTANRNHTDSAGTPHVSGGKMLSALESTVPPSQPPPVGTSAIHMSLLEMRRSVAELRLQLQQMRQLQ
LQNQELLRAMMKKAELEISGKVMETMKRLEDPVQRQRVLVEQERQKYLHEEEKIVKKLCELEDFVEDLKK
DSTAASRLVTLKDVEDGAFLLRQVGEAVATLKGEFPTLQNKMRAILRIEVEAVRFLKEEPHKLDSLLKRV
RSMTDVLTMLRRHVTDGLLKGTDAAQAAQYMAMEKATAAEVLKSQEEAAHTSGQPFHSTGAPGDAKSEVV
PLSGMMVRHAQSSPVVIQPSQHSVALLNPAQNLPHVASSPAVPQEATSTLQMSQAPQSPQIPMNGSAMQS
LFIEEIHSVSAKNRAVSIEKAEKKWEEKRQNLDHYNGKEFEKLLEEAQANIMKSIPNLEMPPATGPLPRG
DAPVDKVELSEDSPNSEQDLEKLGGKSPPPPPPPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKASSED
AGPSPQTRATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSGAPQTSRMPVPMSAKN
RPGTLDKPGKQSKLQDPRQYRQVVLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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