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Report for CCDS5974.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5974.1 Public Homo sapiens 8 TNKS 24 110 108 CCDS HistoryNCBI Gene:8658Re-query CCDS DB by CCDS ID:5974.1Re-query CCDS DB by GeneID:8658See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5974.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310430.11 ENSP00000311579.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310430.11Link to Ensembl Protein Viewer:ENSP00000311579.6Re-query CCDS DB by Nucleotide ID:ENST00000310430Re-query CCDS DB by Protein ID:ENSP00000311579
Original member Current member NCBI NM_003747.3 NP_003738.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003747.3Link to Protein Sequence:NP_003738.2Re-query CCDS DB by Nucleotide ID:NM_003747Re-query CCDS DB by Protein ID:NP_003738Link to BLAST:NP_003738.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003738.2 1327 O95271-1 1327 100% 0 0

Chromosomal Locations for CCDS 5974.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 9555940 9556612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9580159 9580383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9615582 9615677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9679951 9679987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9680725 9680800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9704663 9704757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9706187 9706253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9706811 9706997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9708371 9708492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9709955 9710046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9710142 9710220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9720374 9720545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9726641 9726720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9730890 9731035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9733279 9733444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9734865 9735084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9735377 9735486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9748024 9748212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9751609 9751846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9752544 9752626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9761516 9761636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9763147 9763244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9764716 9764790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9765692 9765797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9766239 9766425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9770106 9770262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9776650 9776736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3984 nt):
ATGGCGGCGTCGCGTCGCTCTCAGCATCATCACCACCATCATCAACAACAGCTCCAGCCCGCCCCAGGGG
CTTCAGCGCCGCCGCCGCCACCTCCTCCCCCACTCAGCCCTGGCCTGGCCCCGGGGACCACCCCAGCCTC
TCCCACGGCCAGCGGCCTGGCCCCCTTCGCCTCCCCGCGGCACGGCCTAGCGCTGCCGGAGGGGGATGGC
AGTCGGGATCCGCCCGACAGGCCCCGATCCCCGGACCCGGTTGACGGTACCAGCTGTTGCAGTACCACCA
GCACAATCTGTACCGTCGCCGCCGCTCCCGTGGTCCCAGCGGTTTCTACTTCATCTGCCGCTGGGGTCGC
TCCCAACCCAGCCGGCAGTGGCAGTAACAATTCACCGTCGTCCTCTTCTTCCCCGACTTCTTCCTCATCT
TCCTCTCCATCCTCCCCTGGATCGAGCTTGGCGGAGAGCCCCGAGGCGGCCGGAGTTAGCAGCACAGCAC
CACTGGGGCCTGGGGCAGCAGGACCTGGGACAGGGGTCCCAGCAGTGAGCGGGGCCCTACGGGAACTGCT
GGAGGCCTGTCGCAATGGGGACGTGTCCCGGGTAAAGAGGCTGGTGGACGCGGCAAACGTAAATGCAAAG
GACATGGCCGGCCGGAAGTCTTCTCCCCTGCACTTCGCTGCAGGTTTTGGAAGGAAGGATGTTGTAGAAC
ACTTACTACAGATGGGTGCTAATGTCCACGCTCGTGATGATGGAGGTCTCATCCCGCTTCATAATGCCTG
TTCTTTTGGCCATGCTGAGGTTGTGAGTCTGTTATTGTGCCAAGGAGCTGATCCAAATGCCAGGGATAAC
TGGAACTATACACCTCTGCATGAAGCTGCTATTAAAGGGAAGATCGATGTGTGCATTGTGCTGCTGCAGC
ACGGAGCTGACCCAAACATTCGGAACACTGATGGGAAATCAGCCCTGGACCTGGCAGATCCTTCAGCAAA
AGCTGTCCTTACAGGTGAATACAAGAAAGACGAACTCCTAGAAGCTGCTAGGAGTGGTAATGAAGAAAAA
CTAATGGCTTTACTGACTCCTCTAAATGTGAATTGCCATGCAAGTGATGGGCGAAAGTCGACTCCTTTAC
ATCTAGCAGCGGGCTACAACAGAGTTCGAATAGTTCAGCTTCTTCTTCAGCATGGTGCTGATGTTCATGC
AAAAGACAAAGGTGGACTTGTGCCTCTTCATAATGCATGTTCATATGGACATTATGAAGTCACAGAACTG
CTACTAAAGCATGGAGCTTGTGTTAATGCCATGGATCTCTGGCAGTTTACTCCACTGCACGAGGCTGCTT
CCAAGAACCGTGTAGAAGTCTGCTCTTTGTTACTTAGCCATGGCGCTGATCCTACATTAGTCAACTGCCA
TGGCAAAAGTGCTGTGGATATGGCTCCAACTCCGGAGCTTAGGGAGAGATTGACTTATGAATTTAAAGGT
CATTCTTTACTACAAGCAGCCAGAGAAGCAGACTTAGCTAAAGTTAAAAAAACACTCGCTCTGGAAATCA
TTAATTTCAAACAACCGCAGTCTCATGAAACAGCACTGCACTGTGCTGTGGCCTCTCTGCATCCCAAACG
TAAACAAGTGACAGAATTGTTACTTAGAAAAGGAGCAAATGTTAATGAAAAAAATAAAGATTTCATGACT
CCCCTGCATGTTGCAGCCGAAAGAGCCCATAATGATGTCATGGAAGTTCTGCATAAGCATGGCGCCAAGA
TGAATGCACTGGACACCCTTGGTCAGACTGCTTTGCATAGAGCCGCCCTAGCAGGTCACCTGCAGACCTG
CCGCCTCCTGCTGAGTTACGGCTCTGACCCCTCCATCATCTCCTTACAAGGCTTCACAGCAGCACAGATG
GGCAATGAAGCAGTGCAGCAGATTCTGAGTGAGAGTACACCTATACGTACTTCTGATGTTGATTATCGAC
TCTTAGAGGCATCTAAAGCTGGAGACTTGGAAACTGTGAAGCAACTTTGCAGCTCTCAAAATGTGAATTG
TAGAGACTTAGAGGGCCGGCATTCCACGCCCTTACACTTCGCAGCAGGCTACAACCGCGTGTCTGTTGTA
GAGTACCTGCTACACCACGGTGCCGATGTCCATGCCAAAGACAAGGGTGGCTTGGTGCCCCTTCATAATG
CCTGTTCATATGGACACTATGAGGTGGCTGAGCTTTTAGTAAGGCATGGGGCTTCTGTCAATGTGGCGGA
CTTATGGAAATTTACCCCTCTCCATGAAGCAGCAGCTAAAGGAAAGTATGAAATCTGCAAGCTCCTTTTA
AAACATGGAGCAGATCCAACTAAAAAGAACAGAGATGGAAATACACCTTTGGATTTGGTAAAGGAAGGAG
ACACAGATATTCAGGACTTACTGAGAGGGGATGCTGCTTTGTTGGATGCTGCCAAGAAGGGCTGCCTGGC
AAGAGTGCAGAAGCTCTGTACCCCAGAGAATATCAACTGCAGAGACACCCAGGGCAGAAATTCAACCCCT
CTGCACCTGGCAGCAGGCTATAATAACCTGGAAGTAGCTGAATATCTTCTAGAGCATGGAGCTGATGTTA
ATGCCCAGGACAAGGGTGGTTTAATTCCTCTTCATAATGCGGCATCTTATGGGCATGTTGACATAGCGGC
TTTATTGATAAAATACAACACGTGTGTAAATGCAACAGATAAGTGGGCGTTTACTCCCCTCCATGAAGCA
GCCCAGAAAGGAAGGACGCAGCTGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCATGAAGAACC
AGGAAGGCCAGACGCCTCTGGATCTGGCAACAGCTGACGATATCAGAGCTTTGCTGATAGATGCCATGCC
CCCAGAGGCCTTACCTACCTGTTTTAAACCTCAGGCTACTGTAGTGAGTGCCTCTCTGATCTCACCAGCA
TCCACCCCCTCCTGCCTCTCGGCTGCCAGCAGCATAGACAACCTCACTGGCCCTTTAGCAGAGTTGGCCG
TAGGAGGAGCCTCCAATGCAGGGGATGGCGCCGCGGGAACAGAAAGGAAGGAAGGAGAAGTTGCTGGTCT
TGACATGAATATCAGCCAATTTCTAAAAAGCCTTGGCCTTGAACACCTTCGGGATATCTTTGAAACAGAA
CAGATTACACTAGATGTGTTGGCTGATATGGGTCATGAAGAGTTGAAAGAAATAGGCATCAATGCATATG
GGCACCGCCACAAATTAATCAAAGGAGTAGAAAGACTCTTAGGTGGACAACAAGGCACCAATCCTTATTT
GACTTTTCACTGTGTTAATCAGGGAACGATTTTGCTGGATCTTGCTCCAGAAGATAAAGAATATCAGTCA
GTGGAAGAAGAGATGCAAAGTACTATTCGAGAACACAGAGATGGTGGTAATGCTGGCGGCATCTTCAACA
GATACAATGTCATTCGAATTCAAAAAGTTGTCAACAAGAAGTTGAGGGAGCGGTTCTGCCACCGACAGAA
GGAAGTGTCTGAGGAGAATCACAACCATCACAATGAGCGCATGTTGTTTCATGGTTCTCCTTTCATTAAT
GCCATTATTCATAAAGGGTTTGATGAGCGACATGCATACATAGGAGGAATGTTTGGGGCCGGGATTTATT
TTGCTGAAAACTCCTCAAAAAGCAACCAATATGTTTATGGAATTGGAGGAGGAACAGGCTGCCCTACACA
CAAGGACAGGTCATGCTATATATGTCACAGACAAATGCTCTTCTGTAGAGTGACCCTTGGGAAATCCTTT
CTGCAGTTTAGCACCATGAAAATGGCCCACGCGCCTCCAGGGCACCACTCAGTCATTGGTAGACCGAGCG
TCAATGGGCTGGCATATGCTGAATATGTCATCTACAGAGGAGAACAGGCATACCCAGAGTATCTTATCAC
TTACCAGATCATGAAGCCAGAAGCCCCTTCCCAGACCGCAACAGCCGCAGAGCAGAAGACCTAG

Translation (1327 aa):
MAASRRSQHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRHGLALPEGDG
SRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPAGSGSNNSPSSSSSPTSSSS
SSPSSPGSSLAESPEAAGVSSTAPLGPGAAGPGTGVPAVSGALRELLEACRNGDVSRVKRLVDAANVNAK
DMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDN
WNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEK
LMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTEL
LLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG
HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKDFMT
PLHVAAERAHNDVMEVLHKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQM
GNEAVQQILSESTPIRTSDVDYRLLEASKAGDLETVKQLCSSQNVNCRDLEGRHSTPLHFAAGYNRVSVV
EYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKLLL
KHGADPTKKNRDGNTPLDLVKEGDTDIQDLLRGDAALLDAAKKGCLARVQKLCTPENINCRDTQGRNSTP
LHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNAASYGHVDIAALLIKYNTCVNATDKWAFTPLHEA
AQKGRTQLCALLLAHGADPTMKNQEGQTPLDLATADDIRALLIDAMPPEALPTCFKPQATVVSASLISPA
STPSCLSAASSIDNLTGPLAELAVGGASNAGDGAAGTERKEGEVAGLDMNISQFLKSLGLEHLRDIFETE
QITLDVLADMGHEELKEIGINAYGHRHKLIKGVERLLGGQQGTNPYLTFHCVNQGTILLDLAPEDKEYQS
VEEEMQSTIREHRDGGNAGGIFNRYNVIRIQKVVNKKLRERFCHRQKEVSEENHNHHNERMLFHGSPFIN
AIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSF
LQFSTMKMAHAPPGHHSVIGRPSVNGLAYAEYVIYRGEQAYPEYLITYQIMKPEAPSQTATAAEQKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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