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Report for CCDS59553.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59553.1 Public Mus musculus 10 Anks1b 23 108 98 CCDS HistoryNCBI Gene:77531Re-query CCDS DB by CCDS ID:59553.1Re-query CCDS DB by GeneID:77531See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59553.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000182430.7 ENSMUSP00000138660.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182430.7Link to Ensembl Protein Viewer:ENSMUSP00000138660.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182430Re-query CCDS DB by Protein ID:ENSMUSP00000138660
Original member Current member NCBI NM_181398.4 NP_852063.1 Accepted alive Link to Nucleotide Sequence:NM_181398.4Link to Protein Sequence:NP_852063.1Re-query CCDS DB by Nucleotide ID:NM_181398Re-query CCDS DB by Protein ID:NP_852063Link to BLAST:NP_852063.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_852063.1 426 Q8BIZ1-2 426 99.7653% 0 1

Chromosomal Locations for CCDS 59553.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 90576992 90577195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90644458 90644556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90680767 90680919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90895099 90895206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90921296 90921424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90923531 90923602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90940564 90940575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90941426 90941512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90948535 90948672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90966225 90966392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 90969804 90969914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1281 nt):
ATGATGTGGCAATGCCACCCCTCAGCCCCGGACTACCGCTATTACCCCGTGGACGGCTACTCCCTGCTAA
AGCGCTTCCCTCTTCACCCTCTTACAGGACCCAGATGCCCTGTCCAAACAGTGGGACAATGGCTGGAAAG
CATTGGGCTACCTCAGTACGAGAACCACCTGATGGCTAATGGATTTGACAGTGTACAGTTTATGGGAAGC
AATGTTATGGAAGATCAGGATTTGTTGGAAATTGGAATCCTTAACTCTGGCCACAGACAGAGAATTCTAC
AAGCGATCCAGCTCCTTCCAAAGATGAGGCCCATCGGCCATGATGGCTACCATCCCACCTCTGTAGCCGA
GTGGCTGGATTCCATTGAGCTGGGTGATTACACCAAAGCCTTTCTCATCAATGGCTACACGTCCATGGAC
CTGTTGAAAAAGATCTGGGAGCTTGAGCTTATTAATGTTTTAAAAATCAGTTTGATTGGCCACAGGAAAC
GCATTTTGGCATCTTTGGGAGATAGGCTGCACGACGACCCTCCACAGAAGCCCCCTCGGTCCATCACCCT
CAGGACAGGGGACTGGGGAGAACCTTCCATCACCTTGCGACCTCCTAATGAAGCCACAGCCTCAACTCCC
GTCCAGTACTGGCAGCATCATCCGGAAAAACTCATCTTCCAGTCATGTGACTACAAAGCCTTTTATTTAG
GTTCTATGCTGATAAAAGAGCTGAGGGGGACAGAATCAACACAGGATGCTTGTGCAAAGATGCGGGCTAA
CTGTCAGAAGTCTACAGAGCAAATGAAGAAAGTCCCCACTATCATCCTTTCCGTCTCATATAAAGGAGTA
AAATTTATCGATGCGGCAAATAAGAATATAATCGCCGAACATGAAATTCGTAATATCTCCTGTGCTGCCC
AGGACCCAGAAGACCTCTCAACATTTGCCTATATCACAAAAGATTTGAAGTCCAACCACCACTACTGTCA
CGTGTTTACTGCCTTTGATGTGAATTTAGCCTATGAAATCATCCTGACGCTGGGACAGGCATTTGAGGTC
GCTTACCAACTAGCCCTACAAGCAAGAAAAGGGGGCCATTCCTCCACACTCCCAGAAAGCTTTGAGAACA
AGCCCTCGAAACCCATCCCAAAGCCCCGAGTTAGCATTCGGAAGTCAGTGCAGATCGACCCTTCTGAGCA
AAAGACTCTGGCCAATCTGCCGTGGATTGTGGAGCCGGGGCAAGAAGCCAAGAGGGGCATTAATACCAAG
TATGAAACCACGATTTTCTGA

Translation (426 aa):
MMWQCHPSAPDYRYYPVDGYSLLKRFPLHPLTGPRCPVQTVGQWLESIGLPQYENHLMANGFDSVQFMGS
NVMEDQDLLEIGILNSGHRQRILQAIQLLPKMRPIGHDGYHPTSVAEWLDSIELGDYTKAFLINGYTSMD
LLKKIWELELINVLKISLIGHRKRILASLGDRLHDDPPQKPPRSITLRTGDWGEPSITLRPPNEATASTP
VQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYKGV
KFIDAANKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNLAYEIILTLGQAFEV
AYQLALQARKGGHSSTLPESFENKPSKPIPKPRVSIRKSVQIDPSEQKTLANLPWIVEPGQEAKRGINTK
YETTIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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