NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS59293.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59293.1 Public Homo sapiens 17 HROB 24 110 108 CCDS HistoryNCBI Gene:78995Re-query CCDS DB by CCDS ID:59293.1Re-query CCDS DB by GeneID:78995See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59293.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000585683.6 ENSP00000466618.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000585683.6Link to Ensembl Protein Viewer:ENSP00000466618.1Re-query CCDS DB by Nucleotide ID:ENST00000585683Re-query CCDS DB by Protein ID:ENSP00000466618
Original member Current member NCBI NM_001171251.3 NP_001164722.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001171251.3Link to Protein Sequence:NP_001164722.1Re-query CCDS DB by Nucleotide ID:NM_001171251Re-query CCDS DB by Protein ID:NP_001164722Link to BLAST:NP_001164722.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164722.1 646 Q8N3J3-4 646 100% 0 0

Chromosomal Locations for CCDS 59293.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44142143 44142145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44145203 44145253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44147858 44149027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44150961 44151044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44152637 44152777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44154556 44154664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44154853 44154938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44155286 44155411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44157833 44157941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44161871 44161932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1941 nt):
ATGGCGTGCAGTTTGCAGAAGCTGTTTGCTGTGGAAGAGGAGTTTGAAGATGAGGATTTCTTGTCTGCTG
TGGAGGATGCAGAGAACCGGTTTACTGGCTCACTGCCTGTGAATGCTGGGCGCCTGAGACCTGTCTCTTC
TAGGCCACAGGAGACTGTGCAGGCACAGTCCTCCAGGCTGCTGCTGTTACACCCCACTGCTCCCTCAGAG
GCTTTGGGCCTGCCAGACTTGGACCTCTGCCTCCCTGCCTCCAGCACGCCCAGTGCTGACAGCCGTCCAT
CATGCATAGGAGCAGCTCCCCTAAGGCCTGTCTCTACTTCCAGCAGCTGGATTGGCAATCAGAGAAGAGT
GACAGTGACAGAAGTGCTCAGAGAGACAGCAAGACCTCAGTCCTCAGCCTTACACCCCCTACTCACCTTT
GAGAGCCAACAGCAGCAAGTTGGTGGCTTTGAGGGGCCTGAACAAGACGAATTTGATAAAGTCCTGGCAA
GCATGGAGTTGGAGGAGCCTGGCATGGAGCTGGAATGTGGAGTCAGCAGTGAGGCCATACCAATCCTGCC
TGCCCAGCAGCGGGAGGGTTCAGTATTGGCTAAAAAAGCCCGGGTAGTTGATCTGAGTGGATCTTGCCAG
AAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGATCCTGTCA
TCCAATGTAGGACTCCACGACCCCCCTTGAGACCTGGTGCTGTGGGTCACCTTCCTGTTCCAACTGCCTT
AACAGTTCCCACTCAGCAACTCCACTGGGAAGTCTGTCCGCAACGCTCCCCTGTTCAAGCACTTCAGCCT
CTCCAAGCTGCTAGAGGGACCATTCAGAGCAGCCCTCAAAATCGTTTCCCTTGTCAGCCATTCCAGTCTC
CAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCAGACCTCGAACTCCCAACTCAAGCTGTTCTACTCC
CTCAAGGACTAGCTCTGGATTATTTCCTCGGATACCCTTACAACCGCAAGCTCCAGTGTCTTCCATTGGG
TCTCCTGTTGGTACCCCAAAAGGTCCCCAGGGAGCTCTGCAGACACCCATAGTCACCAACCACCTGGTGC
AGCTAGTCACTGCTGCCAGCCGGACACCCCAGCAGCCCACCCATCCCTCCACCCGAGCCAAAACTCGCCG
TTTCCCTGGCCCAGCTGGGATCCTGCCTCACCAGCAGAGTGGGAGAAGTCTGGAGGACATCATGGTTTCC
GCGCCCCAAACTCCAACCCATGGTGCTCTGGCTAAATTCCAGACAGAGATTGTTGCTAGTTCCCAGGCAT
CTGTGGAGGAGGATTTTGGGCGAGGGCCCTGGCTGACCATGAAATCCACGCTAGGCCTGGATGAGAGAGA
CCCTAGCTGCTTCCTCTGTACCTACAGCATTGTCATGGTGCTGCGCAAGGCAGCCCTGAAGCAGCTTCCT
AGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGACTCGGAGCACAATGGACGCCAGTGTGG
TTTTCAAGGACCCCACGGGAGAGATGCAGGGGACGGTGCACAGGTTGCTGCTGGAGACGTGCCAGAATGA
GCTGAAGCCTGGCTCAGTGCTGCTGCTGAAGCAGATTGGAGTGTTTTCTCCTTCACTTCGAAATCACTAC
CTCAACGTGACACCCAACAACCTGGTCCATATTTACAGCCCGGATTCTGGGGATGGGAGCTTCCTCAAGC
CATCTCAGCCCTTCCCCAAGGATTCAGGGAGCTTCCAGCATGATGTGGCTGCAAAGCCCGAGGAAGGCTT
CAGAACAGCACAGAACCTAGAGGCAGAGGCGTCCCCTGAGGAAGAACTCCCAGAAGCAGATGACCTGGAT
GGACTCCTGAGTGAGCTTCCTGAAGACTTCTTCTGTGGGACCAGTAGTTGA

Translation (646 aa):
MACSLQKLFAVEEEFEDEDFLSAVEDAENRFTGSLPVNAGRLRPVSSRPQETVQAQSSRLLLLHPTAPSE
ALGLPDLDLCLPASSTPSADSRPSCIGAAPLRPVSTSSSWIGNQRRVTVTEVLRETARPQSSALHPLLTF
ESQQQQVGGFEGPEQDEFDKVLASMELEEPGMELECGVSSEAIPILPAQQREGSVLAKKARVVDLSGSCQ
KGPVPAIHKAGIMSAQDESLDPVIQCRTPRPPLRPGAVGHLPVPTALTVPTQQLHWEVCPQRSPVQALQP
LQAARGTIQSSPQNRFPCQPFQSPSSWLSGKAHLPRPRTPNSSCSTPSRTSSGLFPRIPLQPQAPVSSIG
SPVGTPKGPQGALQTPIVTNHLVQLVTAASRTPQQPTHPSTRAKTRRFPGPAGILPHQQSGRSLEDIMVS
APQTPTHGALAKFQTEIVASSQASVEEDFGRGPWLTMKSTLGLDERDPSCFLCTYSIVMVLRKAALKQLP
RNKVPNMAVMIKSLTRSTMDASVVFKDPTGEMQGTVHRLLLETCQNELKPGSVLLLKQIGVFSPSLRNHY
LNVTPNNLVHIYSPDSGDGSFLKPSQPFPKDSGSFQHDVAAKPEEGFRTAQNLEAEASPEEELPEADDLD
GLLSELPEDFFCGTSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH