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Report for CCDS59147.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59147.1 Public Homo sapiens 9 CIZ1 24 110 108 CCDS HistoryNCBI Gene:25792Re-query CCDS DB by CCDS ID:59147.1Re-query CCDS DB by GeneID:25792See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59147.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000629610.2 ENSP00000486816.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000629610.2Link to Ensembl Protein Viewer:ENSP00000486816.1Re-query CCDS DB by Nucleotide ID:ENST00000629610Re-query CCDS DB by Protein ID:ENSP00000486816
Original member Current member NCBI NM_001257976.2 NP_001244905.1 Accepted alive Link to Nucleotide Sequence:NM_001257976.2Link to Protein Sequence:NP_001244905.1Re-query CCDS DB by Nucleotide ID:NM_001257976Re-query CCDS DB by Protein ID:NP_001244905Link to BLAST:NP_001244905.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001244905.1 797 Q9ULV3-5 797 100% 0 0

Chromosomal Locations for CCDS 59147.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128166197 128166406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128166759 128166880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128167095 128167164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128169052 128169201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128169406 128169519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128170020 128170107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128176351 128176475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128177566 128177763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128178369 128178490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128178709 128179415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128180415 128180523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128180721 128180814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128185547 128185776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128187863 128187917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2394 nt):
ATGCCACCAGCCACGTATGACACTGCCGGTCTCACCATGCCCACAGCAACACTGGGTAACCTCCGAGGCT
ATGGCATGGCATCCCCAGGCCTCGCAGCCCCCAGCCTCACACCCCCACAACTGGCCACTCCAAATTTGCA
ACAGTTCTTTCCCCAGGCCACTCGCCAGTCCTTGCTGGGACCTCCTCCTGTTGGGGTCCCCATGAACCCT
TCCCAGTTCAACCTTTCAGGACGGAACCCCCAGAAACAGGCCCGGACCTCCTCCTCTACCACCCCCAATC
GAAAGGATTCTTCTTCTCAGACAATGCCTGTGGAAGACAAGTCAGACCCCCCAGAGGGGTCTGAGGAAGC
CGCAGAGCCCCGGATGGACACACCAGAAGACCAAGATTTACCGCCCTGCCCAGAGGACATCGCCAAGGAA
AAACGCACTCCAGCACCTGAGCCTGAGCCTTGTGAGGCGTCCGAGCTGCCAGCAAAGAGATTGAGGAGCT
CAGAAGAGCCCACAGAGAAGGAACCTCCAGGGCAGTTACAGGTGAAGGCCCAGCCGCAGGCCCGGATGAC
AGTACCGAAACAGACACAGACACCAGACCTGCTGCCTGAGGCCCTGGAAGCCCAAGTGCTGCCACGATTC
CAGCCACGGGTCCTGCAGGTCCAGGCCCAGGTGCAGTCACAGACTCAGCCGCGGATACCATCCACAGACA
CCCAGGTGCAGCCAAAGCTGCAGAAGCAGGCGCAAACACAGACCTCTCCAGAGCACTTAGTGCTGCAACA
GAAGCAGGTGCAGCCACAGCTGCAGCAGGAGGCAGAGCCACAGAAGCAGGTGCAGCCACAGGTACAGCCA
CAGGCACATTCACAGGGCCCAAGGCAGGTGCAGCTGCAGCAGGAGGCAGAGCCGCTGAAGCAGGTGCAGC
CACAGGTGCAGCCCCAGGCACATTCACAGCCCCCAAGGCAGGTGCAGCTGCAGCTGCAGAAGCAGGTCCA
GACACAGACATATCCACAGGTCCACACACAGGCACAGCCAAGCGTCCAGCCACAGGAGCATCCTCCAGCG
CAGGTGTCAGTACAGCCACCAGAGCAGACCCATGAGCAGCCTCACACCCAGCCGCAGGTGTCGTTGCTGG
CTCCAGAGCAAACACCAGTTGTGGTTCATGTCTGCGGGCTGGAGATGCCACCTGATGCAGTAGAAGCTGG
TGGAGGCATGGAAAAGACCTTGCCAGAGCCTGTGGGCACCCAAGTCAGCATGGAAGAGATTCAGAATGAG
TCGGCCTGTGGCCTAGATGTGGGAGAATGTGAAAACAGAGCGAGAGAGATGCCAGGGGTATGGGGCGCCG
GGGGCTCCCTGAAGGTCACCATTCTGCAGAGCAGTGACAGCCGGGCCTTTAGCACTGTACCCCTGACACC
TGTCCCCCGCCCCAGTGACTCCGTCTCCTCCACCCCTGCGGCTACCAGCACTCCCTCTAAGCAGGCCCTC
CAGTTCTTCTGCTACATCTGCAAGGCCAGCTGCTCCAGCCAGCAGGAGTTCCAGGACCACATGTCGGAGC
CTCAGCACCAGCAGCGGCTAGGGGAGATCCAGCACATGAGCCAAGCCTGCCTCCTGTCCCTGCTGCCCGT
GCCCCGGGACGTCCTGGAGACAGAGGATGAGGAGCCTCCACCAAGGCGCTGGTGCAACACCTGCCAGCTC
TACTACATGGGGGACCTGATCCAACACCGCAGGACACAGGACCACAAGATTGCCAAACAATCCTTGCGAC
CCTTCTGCACCGTTTGCAACCGCTACTTCAAAACCCCTCGCAAGTTTGTGGAGCACGTGAAGTCCCAGGG
GCATAAGGACAAAGCCAAGGAGCTGAAGTCGCTTGAGAAAGAAATTGCTGGCCAAGATGAGGACCACTTC
ATTACAGTGGACGCTGTGGGTTGCTTCGAGGGTGATGAAGAAGAGGAAGAGGATGATGAGGATGAAGAAG
AGATCGAGGTTGAGGAGGAACTCTGCAAGCAGGTGAGGTCCAGAGATATATCCAGAGAGGAGTGGAAGGG
CTCGGAGACCTACAGCCCCAATACTGCATATGGTGTGGACTTCCTGGTGCCCGTGATGGGCTATATCTGC
CGCATCTGCCACAAGTTCTATCACAGCAACTCAGGGGCACAGCTCTCCCACTGCAAGTCCCTGGGCCACT
TTGAGAACCTGCAGAAATACAAGGCGGCCAAGAACCCCAGCCCCACCACCCGACCTGTGAGCCGCCGGTG
CGCAATCAACGCCCGGAACGCTTTGACAGCCCTGTTCACCTCCAGCGGCCGCCCACCCTCCCAGCCCAAC
ACCCAGGACAAAACACCCAGCAAGGTGACGGCTCGACCCTCCCAGCCCCCACTACCTCGGCGCTCAACCC
GCCTCAAAACCTGA

Translation (797 aa):
MPPATYDTAGLTMPTATLGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPPVGVPMNP
SQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPCPEDIAKE
KRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALEAQVLPRF
QPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQPQVQP
QAHSQGPRQVQLQQEAEPLKQVQPQVQPQAHSQPPRQVQLQLQKQVQTQTYPQVHTQAQPSVQPQEHPPA
QVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEEIQNE
SACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVPRPSDSVSSTPAATSTPSKQAL
QFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPRDVLETEDEEPPPRRWCNTCQL
YYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHKDKAKELKSLEKEIAGQDEDHF
ITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSETYSPNTAYGVDFLVPVMGYIC
RICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTTRPVSRRCAINARNALTALFTSSGRPPSQPN
TQDKTPSKVTARPSQPPLPRRSTRLKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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