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Report for CCDS59131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59131.1 Public Homo sapiens 9 FRMD3 24 110 108 CCDS HistoryNCBI Gene:257019Re-query CCDS DB by CCDS ID:59131.1Re-query CCDS DB by GeneID:257019See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328788.5 ENSP00000328615.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000328788.5Link to Ensembl Protein Viewer:ENSP00000328615.1Re-query CCDS DB by Nucleotide ID:ENST00000328788Re-query CCDS DB by Protein ID:ENSP00000328615
Original member Current member NCBI NM_001244962.2 NP_001231891.1 Accepted alive Link to Nucleotide Sequence:NM_001244962.2Link to Protein Sequence:NP_001231891.1Re-query CCDS DB by Nucleotide ID:NM_001244962Re-query CCDS DB by Protein ID:NP_001231891Link to BLAST:NP_001231891.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231891.1 213 A2A2Y4-4 213 100% 0 0

Chromosomal Locations for CCDS 59131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 83243202 83243215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83248055 83248516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83267012 83267177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGCAGGCCGAGGAGACCAAGGGGATTGGAATAACCAGTATGGCAAAATGCTTGGTCAAGATCCAGACTC
GACGAAGCCTCCAATTGCACATGGTGAACCACTGCAACAGTAATGTGTTTGTTCGTCTGCTGAGACTCGG
CTCCAAGGTCACAGCTCGTAACACTGGTGTTCCATTGCCTAAAGAGGAGAACATTTCTGCTCCCTTGATC
TCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCCCTAGTGAAGAGGAAGATAAAATAAAAG
AAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGCCAGCCTGCTCCCCACCCCTGTGGATGA
CGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAGTTGGAAAGAGAAGACACAGATTCATTT
GAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAGAAGAGGAGCTGAAGGAGGCTCGCCGTG
CTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGTGAACCCACTGGTCAAGAGTTTTTCCAG
GCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCCCTGCTCCTCCTCCTTTTGGAGTCAGTC
TCCATGCAGTAA

Translation (213 aa):
MQAEETKGIGITSMAKCLVKIQTRRSLQLHMVNHCNSNVFVRLLRLGSKVTARNTGVPLPKEENISAPLI
SSSPVKAAREYEDPPSEEEDKIKEEPLTISELVYNPSASLLPTPVDDDEIDMLFDCPSRLELEREDTDSF
EDLEADENAFLIAEEEELKEARRALSWSYDILTGHIRVNPLVKSFSRLLVVGLGLLLFVFPLLLLLLESV
SMQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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