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Report for CCDS58823.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58823.1 Public Homo sapiens 3 ARPP21 24 110 108 CCDS HistoryNCBI Gene:10777Re-query CCDS DB by CCDS ID:58823.1Re-query CCDS DB by GeneID:10777See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58823.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417925.5 ENSP00000412326.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417925.5Link to Ensembl Protein Viewer:ENSP00000412326.1Re-query CCDS DB by Nucleotide ID:ENST00000417925Re-query CCDS DB by Protein ID:ENSP00000412326
Original member Current member NCBI NM_001267619.2 NP_001254548.1 Accepted alive Link to Nucleotide Sequence:NM_001267619.2Link to Protein Sequence:NP_001254548.1Re-query CCDS DB by Nucleotide ID:NM_001267619Re-query CCDS DB by Protein ID:NP_001254548Link to BLAST:NP_001254548.1
Original member Current member NCBI NM_001385484.1 NP_001372413.1 Accepted alive Link to Nucleotide Sequence:NM_001385484.1Link to Protein Sequence:NP_001372413.1Re-query CCDS DB by Nucleotide ID:NM_001385484Re-query CCDS DB by Protein ID:NP_001372413Link to BLAST:NP_001372413.1
Original member Current member NCBI NM_001385485.1 NP_001372414.1 Accepted alive Link to Nucleotide Sequence:NM_001385485.1Link to Protein Sequence:NP_001372414.1Re-query CCDS DB by Nucleotide ID:NM_001385485Re-query CCDS DB by Protein ID:NP_001372414Link to BLAST:NP_001372414.1
Original member Current member NCBI NM_001385486.1 NP_001372415.1 Accepted alive Link to Nucleotide Sequence:NM_001385486.1Link to Protein Sequence:NP_001372415.1Re-query CCDS DB by Nucleotide ID:NM_001385486Re-query CCDS DB by Protein ID:NP_001372415Link to BLAST:NP_001372415.1
Original member Current member NCBI NM_001385487.1 NP_001372416.1 Accepted alive Link to Nucleotide Sequence:NM_001385487.1Link to Protein Sequence:NP_001372416.1Re-query CCDS DB by Nucleotide ID:NM_001385487Re-query CCDS DB by Protein ID:NP_001372416Link to BLAST:NP_001372416.1
Original member Current member NCBI NM_001385564.1 NP_001372493.1 Accepted alive Link to Nucleotide Sequence:NM_001385564.1Link to Protein Sequence:NP_001372493.1Re-query CCDS DB by Nucleotide ID:NM_001385564Re-query CCDS DB by Protein ID:NP_001372493Link to BLAST:NP_001372493.1
Original member Current member NCBI NM_001385587.1 NP_001372516.1 Accepted alive Link to Nucleotide Sequence:NM_001385587.1Link to Protein Sequence:NP_001372516.1Re-query CCDS DB by Nucleotide ID:NM_001385587Re-query CCDS DB by Protein ID:NP_001372516Link to BLAST:NP_001372516.1
Original member Current member NCBI NM_001385588.2 NP_001372517.1 Accepted alive Link to Nucleotide Sequence:NM_001385588.2Link to Protein Sequence:NP_001372517.1Re-query CCDS DB by Nucleotide ID:NM_001385588Re-query CCDS DB by Protein ID:NP_001372517Link to BLAST:NP_001372517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001254548.1 813 Q9UBL0-3 813 100% 0 0
NP_001372413.1 813 Q9UBL0-3 813 100% 0 0
NP_001372414.1 813 Q9UBL0-3 813 100% 0 0
NP_001372415.1 813 Q9UBL0-3 813 100% 0 0
NP_001372416.1 813 Q9UBL0-3 813 100% 0 0
NP_001372493.1 813 Q9UBL0-3 813 100% 0 0
NP_001372516.1 813 Q9UBL0-3 813 100% 0 0
NP_001372517.1 813 Q9UBL0-3 813 100% 0 0

Chromosomal Locations for CCDS 58823.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 35681752 35681880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35682848 35682889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35683726 35683815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35687739 35687883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35689307 35689385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35690081 35690140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35690865 35691005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35706974 35707082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35715439 35715476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35717298 35717357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35721605 35721834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35729303 35729536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35737178 35737362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35738214 35738318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35739317 35739577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35743839 35743965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35792382 35792530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35793701 35793958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2442 nt):
ATGTCTGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTC
CAGAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAAGAGGAGAAACTGGAACTGCAGAGGCGGCTGGA
GGCTCAGAATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGTAAACTGACTCGCAGCCTTGCT
GTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGGAATCAATTCATTTACAGC
TTTCCAGTTTTTCCAGCCTGCAAGAGGAGGATAAATCTAGGAAAGATGACTCTGAAAGAGAAAAAGAAAA
GGATAAAAACAAAGATAAAACCTCTGAAAAACCCAAGATCAGAATGTTATCAAAAGATTGCAGCCAAGAA
TACACGGATTCTACAGGCATAGACTTACACGAGTTTCTGATTAACACATTAAAGAATAATTCCAGGGACA
GGATGATACTTTTGAAAATGGAGCAGGAAATTATTGATTTCATTGCTGACAACAATAATCATTATAAAAA
GTTCCCTCAGATGTCATCGTATCAGAGGATGCTTGTCCATCGAGTGGCAGCTTATTTTGGATTGGATCAC
AATGTGGATCAAACAGGAAAATCTGTTATCATCAACAAGACCAGCAGCACCAGAATACCAGAGCAAAGGT
TTTGTGAACATTTAAAAGATGAAAAAGGTGAAGAATCCCAGAAGCGGTTTATCTTGAAGCGAGATAACTC
TAGTATTGATAAAGAAGACAATCAGTCAGTTTGCTCCCAGGAAAGCCTTTTTGTGGAAAACAGTAGGCTC
TTGGAAGACAGTAACATATGCAATGAGACCTATAAGAAAAGACAGCTCTTTCGGGGCAACAGAGATGGCT
CAGGGAGAACATCTGGGAGTCGACAGAGCAGCTCAGAAAATGAACTCAAGTGGTCTGACCACCAAAGGGC
CTGGAGCAGCACAGACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCATGACCAAGACGGCGAGTTTT
GGGGGCATCACGGTGCTGACCAGGGGTGACAGCACTTCCAGTACTAGGAGTACCGGGAAGCTGTCCAAAG
CAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCCACCTCTCCAGAG
CACACCCCTAGTCTCAGGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAATGGAATAGGG
GGCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGCATCCCGCCTG
GAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTGCAATATACAA
CCCACCCACCAGTCAGCAGCCCCTGCGAAGCGCCATGGTGGGGCAGTCCCAACAGCAGCCACCACAGCAG
CAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCCACCGCAGCCACAGATGGCAGGCCCTCTGGTCACTC
AGTCTGTCCAGGGGCTGCAGGCTTCCTCCCAGTCAGTGCAATATCCAGCAGTCTCTTTTCCTCCCCAGCA
CCTCCTACCTGTGTCTCCAACGCAGCACTTTCCCATGAGAGATGATGTGGCAACACAGTTTGGCCAGATG
ACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCATCCTCCCTTA
TGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAGCAGCTTCCTACAGGAGGATT
CTCAGGCTCTGGCCCTCCCATCTCCCAGCAGGTCCTCCAGCCCCCTCCCTCACCACAGGGATTTGTGCAA
CAGCCTCCGCCTGCACAGATGCCTGTATATTATTACCCATCTGGTCAGTACCCTACCTCAACCACGCAAC
AGTACCGGCCCATGGCCCCGGTTCAGTACAACGCTCAGAGGAGTCAACAGATGCCACAGGCAGCACAGCA
AGCAGGTTACCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGGCCTAATAGGAGTGCAGCAGCCACCT
CAGAGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCCTACCCAACAA
TGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCAGTCATACCAACAGCCAAT
CATGCTACCTAACCAGGCAGGTCAAGGGTCACTCCCAGCCACTGGAATGCCTGTTTACTGTAATGTCACA
CCGCCCACCCCTCAGAACAACCTTAGGCTGATTGGCCCACACTGCCCCTCCAGCACTGTCCCAGTGATGT
CAGCTAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCTGA

Translation (813 aa):
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLA
VCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKNKDKTSEKPKIRMLSKDCSQE
YTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQMSSYQRMLVHRVAAYFGLDH
NVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQKRFILKRDNSSIDKEDNQSVCSQESLFVENSRL
LEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSNRNLKPAMTKTASF
GGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIG
GQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQ
QPSPQPQQQVQPPQPQMAGPLVTQSVQGLQASSQSVQYPAVSFPPQHLLPVSPTQHFPMRDDVATQFGQM
TLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQ
QPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPP
QSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVT
PPTPQNNLRLIGPHCPSSTVPVMSASCRTNCASMSNAGWQVKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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