NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS58653.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58653.1 Public Homo sapiens 19 EPS15L1 24 110 108 CCDS HistoryNCBI Gene:58513Re-query CCDS DB by CCDS ID:58653.1Re-query CCDS DB by GeneID:58513See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58653.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535753.6 ENSP00000440103.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535753.6Link to Ensembl Protein Viewer:ENSP00000440103.1Re-query CCDS DB by Nucleotide ID:ENST00000535753Re-query CCDS DB by Protein ID:ENSP00000440103
Original member Current member EBI ENST00000602022.5 ENSP00000471981.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000602022.5Link to Ensembl Protein Viewer:ENSP00000471981.1Re-query CCDS DB by Nucleotide ID:ENST00000602022Re-query CCDS DB by Protein ID:ENSP00000471981
Original member Current member NCBI NM_001258375.2 NP_001245304.1 Accepted alive Link to Nucleotide Sequence:NM_001258375.2Link to Protein Sequence:NP_001245304.1Re-query CCDS DB by Nucleotide ID:NM_001258375Re-query CCDS DB by Protein ID:NP_001245304Link to BLAST:NP_001245304.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245304.1 754 Q9UBC2-3 754 100% 0 0

Chromosomal Locations for CCDS 58653.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 16361967 16361984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16385129 16385211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16386171 16386231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16392304 16392440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16393951 16394001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16395344 16395467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16402321 16402485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16403733 16403930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16404588 16404749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16413773 16413845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16417552 16417637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16417948 16418104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16421319 16421476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16425083 16425316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16428702 16428761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16434365 16434490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16436937 16436999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16437770 16437865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16440862 16440909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16441892 16441981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16442178 16442219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16471913 16471945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2265 nt):
ATGGCGGCGCCGCTCATCCCCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGTATGAATCTTATTACA
AGCAGGTCGATCCGGCATACACAGGGAGGGTGGGGGCGAGTGAAGCTGCGCTTTTTCTAAAGAAGTCTGG
CCTCTCGGACATTATCCTTGGGAAGATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTCTTGGACAAA
CAGGGTTTCTATGTTGCACTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAGCAATC
TGAATTTGAGCATGCCACCGCCTAAATTTCACGACACCAGCAGCCCTCTGATGGTCACACCGCCCTCTGC
AGAGGCCCACTGGGCTGTGAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTTTGAAAGCCTCTTGCCC
ATCAATGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCC
TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGC
CATGCACTTGGTGTACCGAGCCCTGGAGAAGGAGCCCGTGCCCTCCGCCCTGCCCCCGTCCCTCATCCCA
CCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCCTGCCAGCCCCCCACCAAAAG
ACAGCCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAA
GCACAGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTTGAT
GAGATATTCCTGAAGACCGACCTGGACCTGGATGGCTACGTGAGTGGCCAGGAGGTGAAGGAGATCTTCA
TGCACTCGGGCCTCACCCAGAACCTTCTAGCACACATATGGGCCCTGGCCGATACGAGGCAAACGGGGAA
GTTAAGCAAAGACCAATTCGCGTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAAAGGCATCGACCCT
CCTCAAGTCCTCTCGCCGGACATGGTCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACAGTTCAGGCT
CTCTCGGCTCCGGGGAGTTTACTGGCGTGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTTACA
AAGAGAGAAATATTCACTGGAACAAGACATTCGAGAAAAGGAAGAGGCAATCAGACAGAAAACCAGCGAG
GTGCAGGAATTACAAAATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGG
ATGCTCAAGACCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCTGAGCGACGTCCG
GCAGAAGTGCCAGGATGAGACTCAGATGATCTCATCACTGAAAACGCAAATCCAATCTCAGGAATCTGAC
TTAAAGTCCCAGGAAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCC
AGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAACGCA
AGACGAAATCAACCAGGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAGC
CTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCG
AAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTT
ATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCA
TTTAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGCAGAACAGCAGACAACTT
CAACAGATCCATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCCACTGACGACTT
CTTCAAGAAACAGACAAAGAATGACCCATTTACCTCGGATCCATTCACGAAAAACCCTTCCTTACCTTCG
AAGCTCGACCCCTTTGAATCCAGTGATCCCTTTTCATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT
TTGGAACCTTAGATCCCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTTTGCCGACTTCAGCCAGAT
GTCCAAGGTAAAAGTACACCTGTAA

Translation (754 aa):
MAAPLIPLSQQIPTGNSLYESYYKQVDPAYTGRVGASEAALFLKKSGLSDIILGKIWDLADPEGKGFLDK
QGFYVALRLVACAQSGHEVTLSNLNLSMPPPKFHDTSSPLMVTPPSAEAHWAVRVEEKAKFDGIFESLLP
INGLLSGDKVKPVLMNSKLPLDVLGRVWDLSDIDKDGHLDRDEFAVAMHLVYRALEKEPVPSALPPSLIP
PSKRKKTVFPGAVPVLPASPPPKDSLRSTPSHGSVSSLNSTGSLSPKHSLKQTQPTVNWVVPVADKMRFD
EIFLKTDLDLDGYVSGQEVKEIFMHSGLTQNLLAHIWALADTRQTGKLSKDQFALAMYFIQQKVSKGIDP
PQVLSPDMVPPSERGTPGPDSSGSLGSGEFTGVKELDDISQEIAQLQREKYSLEQDIREKEEAIRQKTSE
VQELQNDLDRETSSLQELEAQKQDAQDRLDEMDQQKAKLRDMLSDVRQKCQDETQMISSLKTQIQSQESD
LKSQEDDLNRAKSELNRLQQEETQLEQSIQAGRVQLETIIKSLKSTQDEINQARSKLSQLHESRQEAHRS
LEQYDQVLDGAHGASLTDLANLSEGVSLAERGSFGAMDDPFKNKALLFSNNTQELHPDPFQTEDPFKSDP
FKGADPFKGDPFQNDPFAEQQTTSTDPFGGDPFKESDPFRGSATDDFFKKQTKNDPFTSDPFTKNPSLPS
KLDPFESSDPFSSSSVSSKGSDPFGTLDPFGSGSFNSAEGFADFSQMSKVKVHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH