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Report for CCDS58482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58482.1 Public Homo sapiens 16 CENPN 24 110 108 CCDS HistoryNCBI Gene:55839Re-query CCDS DB by CCDS ID:58482.1Re-query CCDS DB by GeneID:55839See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58482.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428963.6 ENSP00000393991.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428963.6Link to Ensembl Protein Viewer:ENSP00000393991.2Re-query CCDS DB by Nucleotide ID:ENST00000428963Re-query CCDS DB by Protein ID:ENSP00000393991
Original member Current member NCBI NM_001270474.2 NP_001257403.1 Accepted alive Link to Nucleotide Sequence:NM_001270474.2Link to Protein Sequence:NP_001257403.1Re-query CCDS DB by Nucleotide ID:NM_001270474Re-query CCDS DB by Protein ID:NP_001257403Link to BLAST:NP_001257403.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257403.1 305 Q96H22-5 305 100% 0 0

Chromosomal Locations for CCDS 58482.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 81011940 81012110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81014136 81014181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81017326 81017385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81017758 81017834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81020100 81020276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81024715 81024778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81026526 81026638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81028171 81028297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 81028569 81028651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGATGAGACTGTTGCTGAGTTCATCAAGAGGACCATCTTGAAAATCCCCATGAATGAACTGACAACAA
TCCTGAAGGCCTGGGATTTTTTGTCTGAAAATCAACTGCAGACTGTAAATTTCCGACAGAGAAAGGAATC
TGTAGTTCAGCACTTGATCCATCTGTGTGAGGAAAAGCGTGCAAGTATCAGTGATGCTGCCCTGTTAGAC
ATCATTTATATGCAATTTCATCAGCACCAGAAAGTTTGGGAAGTTTTTCAGATGAGTAAAGGACCAGGTG
AAGATGTTGACCTTTTTGATATGAAACAATTTAAAAATTCGTTCAAGAAAATTCTTCAGAGAGCATTAAA
AAATGTGACAGTCAGCTTCAGAGAAACTGAGGAGAATGCAGTCTGGATTCGAATTGCCTGGGGAACACAG
TACACAAAGCCAAACCAGTACAAACCTACCTACGTGGTGTACTACTCCCAGACTCCGTACGCCTTCACGT
CCTCCTCCATGCTGAGGCGCAATACACCGCTTCTGGGTCAGACCTTTGAAACTCACAACTCTACGACACC
TCTACAGGAAAGAAGCCTTGGACTAGATATAAATATGGATTCAAGGATCATTCATGAAAACATAGTAGAA
AAAGAGAGAGTCCAACGAATAACTCAAGAAACATTTGGAGATTATCCTCAACCACAACTAGAATTTGCAC
AATATAAGCTTGAAACGAAATTCAAAAGTGGTTTAAATGGGAGCATCTTGGCTGAGAGGGAAGAACCCCT
CCGATGCCTAATAAAGTTCTCTAGCCCACATCTTCTGGAAGCATTGAAATCCTTAGCACCAGCGGGTATT
GCAGATGCTCCACTTTCTCCACTGCTCACTTGCATACCCAACAAGAGAATGAATTATTTTAAAATTAGAG
ATAAATAA

Translation (305 aa):
MDETVAEFIKRTILKIPMNELTTILKAWDFLSENQLQTVNFRQRKESVVQHLIHLCEEKRASISDAALLD
IIYMQFHQHQKVWEVFQMSKGPGEDVDLFDMKQFKNSFKKILQRALKNVTVSFRETEENAVWIRIAWGTQ
YTKPNQYKPTYVVYYSQTPYAFTSSSMLRRNTPLLGQTFETHNSTTPLQERSLGLDINMDSRIIHENIVE
KERVQRITQETFGDYPQPQLEFAQYKLETKFKSGLNGSILAEREEPLRCLIKFSSPHLLEALKSLAPAGI
ADAPLSPLLTCIPNKRMNYFKIRDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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