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Report for CCDS57663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57663.1 Public Mus musculus 9 Zfp872 23 108 98 CCDS HistoryNCBI Gene:619310Re-query CCDS DB by CCDS ID:57663.1Re-query CCDS DB by GeneID:619310See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178901.7 ENSMUSP00000136074.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178901.7Link to Ensembl Protein Viewer:ENSMUSP00000136074.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178901Re-query CCDS DB by Protein ID:ENSMUSP00000136074
Original member Current member NCBI NM_001033813.4 NP_001028985.1 Accepted alive Link to Nucleotide Sequence:NM_001033813.4Link to Protein Sequence:NP_001028985.1Re-query CCDS DB by Nucleotide ID:NM_001033813Re-query CCDS DB by Protein ID:NP_001028985Link to BLAST:NP_001028985.1

Chromosomal Locations for CCDS 57663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 22188229 22188231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22197067 22197193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22197375 22197435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22199418 22200624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1398 nt):
ATGGACTCAGTGGCTTTTGAGGATGTAGCTGTGAACTTCACCCATGAGGAGTGGGCTCTGCTGGACGATT
CTCAGAAGGAACTGTACCAAGATGTGATGCAGGAAACCGTTGATAACCTGGCTTCTATTGGGGAAAATTG
GCAAGACCAGAGCATTAGGGATCAGTGCAAAACTCAGGGAAAATACATAAGTGCTCATGTAGAACAGAGA
CCCCGCGAATGGAAAAGTGCATGCAGGGAAGTCTTCACCCAGCTTCCAGCTCTTAAACAGCAGCATATTC
TCCCTGGAGTAAAGCCCTGTGAATGCGGTATATGTGGAAAAGTTTACTCCTGTCGTTCCTCTCTTAAGAG
GCACATGCAGTGTCATAGTGAGCACACACAGTGGGAGAGTCACGGATTCAGAGGGAAGTTATACCAGTGT
AAGGACTGTGGGAAAGCATTCAGCTTTCAAAGTTCATTTAGAATACATGAGAGGACTCACACTGGAGAGA
AGCCCTACATGTGTAAGGAATGTGGCAAAGCCTTCATTTATCACACCACTTATCAAGGACACATGAGGAT
GCACACAGGAGAAAAACCCTATAAATGTAAGGAGTGTGGGAAGGCTTTCAGCCACCCCAGCTTGTTTCGA
AACCACGAACGAGCTCACTCTGGAGAGAAACCCTATGAGTGTAAGCAGTGTGGGAAGACCTTCAGATATT
ACCAAACCTTTCAGTTACATGAGAGGACTCACACTGGAGAGAAGCCTTACCAGTGTAAGCAGTGTGGGAA
AGCTCTCAGTCGCTCCACATCTTTTCGAAGTCACGAGAGGATCCACACTGGAGAAAAACCATATAAATGT
AGAAAATGTGGCAAAGCCTTTAGATTCCCCAGTTCCTTTCGCAAACATGAAAGAATTCACACTGACGAGA
GGCCTTATGATTGTAAGGAGTGTGGGAAAGCCTTCATTTCTCTCCCAAGCTTTCGAAGGCATGTGATATT
GCACACTGGAAACGGGCCTTACAAATGTAAAGAGTGTGGGAAAGCCTTCGATTGTCCCAGCTCATTTCAC
ATTCATGAGCGAACACACACTGGAGAGAAGCCCCACGAGTGTCAGCGGTGCGGGAAGGCCTTCAGCTGCG
CCAGTTCTGTTCGAATTCATGAGAGGACTCACACGGGAGAGAAGCCCTATGAGTGTAAGCAGTGTGGGAA
GGCCTTTAGTTCCTCTAGCTCCTTTCGCATGCATGAACGAATTCACACTGGAGAGAAACCCTATGAATGT
AGGCAGTGTGGGAAGGCCTTTAGCTTCTCTAGCTCCTTTCGCATGCATGAGAGGACTCACAAGGGAGAGA
AGCCCTATGAATGTAAGCAGTGTGGGAAGGCCTTTAGTTCCTCTAGCTCCTTTCACATGCATGGATGA

Translation (465 aa):
MDSVAFEDVAVNFTHEEWALLDDSQKELYQDVMQETVDNLASIGENWQDQSIRDQCKTQGKYISAHVEQR
PREWKSACREVFTQLPALKQQHILPGVKPCECGICGKVYSCRSSLKRHMQCHSEHTQWESHGFRGKLYQC
KDCGKAFSFQSSFRIHERTHTGEKPYMCKECGKAFIYHTTYQGHMRMHTGEKPYKCKECGKAFSHPSLFR
NHERAHSGEKPYECKQCGKTFRYYQTFQLHERTHTGEKPYQCKQCGKALSRSTSFRSHERIHTGEKPYKC
RKCGKAFRFPSSFRKHERIHTDERPYDCKECGKAFISLPSFRRHVILHTGNGPYKCKECGKAFDCPSSFH
IHERTHTGEKPHECQRCGKAFSCASSVRIHERTHTGEKPYECKQCGKAFSSSSSFRMHERIHTGEKPYEC
RQCGKAFSFSSSFRMHERTHKGEKPYECKQCGKAFSSSSSFHMHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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