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Report for CCDS57175.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57175.1 Public Mus musculus 2 Dync1i2 23 108 98 CCDS HistoryNCBI Gene:13427Re-query CCDS DB by CCDS ID:57175.1Re-query CCDS DB by GeneID:13427See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57175.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100028.9 ENSMUSP00000097605.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100028.9Link to Ensembl Protein Viewer:ENSMUSP00000097605.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000100028Re-query CCDS DB by Protein ID:ENSMUSP00000097605
Original member Current member EBI ENSMUST00000112142.7 ENSMUSP00000107770.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112142.7Link to Ensembl Protein Viewer:ENSMUSP00000107770.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112142Re-query CCDS DB by Protein ID:ENSMUSP00000107770
Original member Current member NCBI NM_001198874.1 NP_001185803.1 Accepted alive Link to Nucleotide Sequence:NM_001198874.1Link to Protein Sequence:NP_001185803.1Re-query CCDS DB by Nucleotide ID:NM_001198874Re-query CCDS DB by Protein ID:NP_001185803Link to BLAST:NP_001185803.1

Chromosomal Locations for CCDS 57175.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 71214448 71214555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71219301 71219418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71228600 71228690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71233649 71233708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71235915 71236030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71246689 71246784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71247013 71247175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71247289 71247388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71247821 71247946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71248787 71248933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71249309 71249422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71249719 71249852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71250842 71250986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71258084 71258224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71260822 71260947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71262648 71262761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGTCGGACAAAAGTGATTTAAAAGCTGAGTTGGAACGTAAGAAGCAACGGTTGGCCCAAATCAGAGAAG
AAAAGAAGAGGAAAGAAGAGGAAAGGAAAAAAAAGGAAACTGATCAGAAGAAGGAAGCTGCTGTTTCTGT
ACAAGAAGAGTCTGATCTTGAAAAAAAAAGAAGAGAAGCTGAGGCATTGCTTCAAAGCATGGGACTAACT
ACGGACTCCCCTATTGTCCCTCCTCCTATGTCTCCATCCTCCAAGTCGGTGAGCACGCCAAGTGAAGCTG
GAAGCCAGGATTCTGGAGATGGCGCCGTGGGATCTAGGACGCTGCATTGGGATACAGATCCATCAGTTCT
TCAGCTTCACTCAGATTCCGATTTGGGACGAGGACCTATTAAACTTGGAATGGCCAAAATTACTCAAGTT
GACTTTCCCCCTCGAGAAATCGTCACATACACAAAGGAAACTCAGACCCCGGTTACAGCTCAACCCAAAG
AAGATGAGGAGGAGGAAGATGATGTAGCAACTCCTAAACCTCCTGTTGAACCTGAAGAAGAGAAAACTTT
GAAAAAAGACGAAGAGAATGATAGCAAAGCTCCACCTCATGAACTAACTGAAGAAGAAAAGCAACAGATT
TTACACTCAGAAGAATTTTTAAGTTTCTTTGACCATTCTACGAGAATTGTAGAAAGAGCCCTTTCTGAGC
AGATTAACATCTTCTTTGACTACAGTGGGAGAGACTTGGAAGACAAAGAAGGGGAGATTCAAGCAGGTGC
TAAGCTGTCATTAAATCGACAGTTCTTTGATGAGCGTTGGTCAAAGCATCGAGTTGTTAGTTGTTTGGAT
TGGTCATCCCAGTATCCAGAATTACTTGTGGCTTCCTATAATAACAATGAAGAGGCTCCTCATGAGCCTG
ATGGTGTGGCCCTCGTGTGGAATATGAAGTACAAAAAAACTACCCCAGAGTATGTGTTCCACTGCCAGTC
AGCTGTAATGTCTGCTACATTTGCAAAATTTCATCCGAATCTTGTTGTTGGAGGTACATATTCAGGCCAG
ATTGTGCTTTGGGATAACCGCAGCAATAAAAGAACTCCTGTCCAGAGAACGCCGCTGTCAGCTGCTGCAC
ACACACACCCTGTCTACTGTGTAAATGTTGTTGGAACACAAAATGCTCACAATCTGATTAGCATCTCTAC
TGATGGAAAAATTTGTTCCTGGAGTTTGGACATGCTTTCCCATCCACAGGATAGCATGGAGTTGGTTCAT
AAACAGTCAAAGGCAGTAGCTGTAACATCTATGTCTTTCCCTGTTGGAGACGTCAACAACTTTGTTGTGG
GCAGTGAAGAAGGTTCTGTGTATACAGCATGCCGCCATGGCAGCAAAGCTGGAATCAGTGAGATGTTTGA
GGGACACCAGGGACCCATCACTGGAATCCACTGTCACGCGGCTGTTGGAGCAGTAGACTTCTCACATCTG
TTTGTCACTTCGTCTTTTGACTGGACAGTTAAACTTTGGACAACTAAGAATAACAAGCCTTTGTACTCAT
TTGAAGATAATTCAGACTATGTCTATGATGTTATGTGGTCACCCACCCACCCAGCCCTGTTTGCCTGTGT
GGACGGCATGGGGAGACTGGATCTATGGAATCTCAACAATGACACAGAGGTACCAACTGCCAGCATTTCT
GTGGAGGGCAACCCTGCTCTTAACCGTGTGAGATGGACCCACTCAGGAAGAGAAATTGCCGTGGGTGATT
CTGAAGGACAGATTGTCATCTATGATGTGGGAGAGCAGATCGCTGTTCCCCGAAATGATGAATGGGCAAG
ATTTGGCCGAACACTCGCAGAAATTAACGCAAACCGAGCTGACGCAGAGGAGGAGGCAGCTACCCGAATC
CCTGCCTAG

Translation (632 aa):
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAAVSVQEESDLEKKRREAEALLQSMGLT
TDSPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRTLHWDTDPSVLQLHSDSDLGRGPIKLGMAKITQV
DFPPREIVTYTKETQTPVTAQPKEDEEEEDDVATPKPPVEPEEEKTLKKDEENDSKAPPHELTEEEKQQI
LHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLD
WSSQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQ
IVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVH
KQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHL
FVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEEEAATRI
PA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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