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Report for CCDS5677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5677.1 Public Homo sapiens 7 CYP3A43 24 110 108 CCDS HistoryNCBI Gene:64816Re-query CCDS DB by CCDS ID:5677.1Re-query CCDS DB by GeneID:64816See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312017.9 ENSP00000312110.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312017.9Link to Ensembl Protein Viewer:ENSP00000312110.5Re-query CCDS DB by Nucleotide ID:ENST00000312017Re-query CCDS DB by Protein ID:ENSP00000312110
Original member Current member NCBI NM_057096.4 NP_476437.1 Accepted alive Link to Nucleotide Sequence:NM_057096.4Link to Protein Sequence:NP_476437.1Re-query CCDS DB by Nucleotide ID:NM_057096Re-query CCDS DB by Protein ID:NP_476437Link to BLAST:NP_476437.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_476437.1 420 Q9HB55-3 420 100% 0 0

Chromosomal Locations for CCDS 5677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99828116 99828186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99836453 99836546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99839120 99839172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99844143 99844242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99847488 99847601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99848166 99848254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99849546 99849694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99855591 99855718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99856833 99856899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99859830 99859990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99861613 99861839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99865906 99865915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1263 nt):
ATGGATCTCATTCCAAACTTTGCCATGGAAACATGGGTTCTTGTGGCTACCAGCCTGGTACTCCTCTATA
TTTATGGGACCCATTCACATAAACTTTTTAAGAAGCTGGGAATTCCTGGGCCAACCCCTCTGCCTTTTCT
GGGAACTATTTTGTTCTACCTTAGGGGTCTTTGGAATTTTGACAGAGAATGTAATGAAAAATACGGAGAA
ATGTGGGGGCTGTATGAGGGGCAACAGCCCATGCTGGTCATCATGGATCCCGACATGATCAAAACAGTGT
TAGTGAAAGAATGTTACTCTGTCTTCACAAACCAGATGCCTTTAGGTCCAATGGGATTTCTGAAAAGTGC
CTTAAGTTTTGCTGAAGATGAAGAATGGAAGAGAATACGAACATTGCTATCTCCAGCTTTCACCAGTGTA
AAATTCAAGGAAATGGTCCCCATCATTTCCCAATGTGGAGATATGTTGGTGAGAAGCCTGAGGCAGGAAG
CAGAGAACAGCAAGTCCATCAACTTGAAAGATTTCTTTGGGGCCTACACCATGGATGTAATCACTGGCAC
ATTATTTGGAGTGAACTTGGATTCTCTCAACAATCCACAAGATCCCTTTCTGAAAAATATGAAGAAGCTT
TTAAAATTGGATTTTTTGGATCCCTTTTTACTCTTAATATCACTCTTTCCATTTCTTACCCCAGTTTTTG
AAGCCCTAAATATCGGTTTGTTTCCAAAAGATGTTACCCATTTTTTAAAAAATTCCATTGAAAGGATGAA
AGAAAGTCGCCTCAAAGATAAACAAAAGCATCGAGTAGATTTCTTTCAACAGATGATCGACTCCCAGAAT
TCCAAAGAAACAAAGTCCCATAAAGCTCTGTCTGATCTGGAGCTTGTGGCCCAGTCAATTATCATCATTT
TTGCTGCCTATGACACAACTAGCACCACTCTCCCCTTCATTATGTATGAACTGGCCACTCACCCTGATGT
CCAGCAGAAACTGCAGGAGGAGATTGACGCAGTTTTACCCAATAAGGCACCTGTCACCTACGATGCCCTG
GTACAGATGGAGTACCTTGACATGGTGGTGAATGAAACGCTCAGATTATTCCCAGTTGTTAGTAGAGTTA
CGAGAGTCTGCAAGAAAGATATTGAAATCAATGGAGTGTTCATTCCCAAAGGGTTAGCAGTGATGGTTCC
AATCTATGCTCTTCACCATGACCCAAAGTACTGGACAGAGCCTGAGAAGTTCTGCCCTGAAAGATCCCAC
TGA

Translation (420 aa):
MDLIPNFAMETWVLVATSLVLLYIYGTHSHKLFKKLGIPGPTPLPFLGTILFYLRGLWNFDRECNEKYGE
MWGLYEGQQPMLVIMDPDMIKTVLVKECYSVFTNQMPLGPMGFLKSALSFAEDEEWKRIRTLLSPAFTSV
KFKEMVPIISQCGDMLVRSLRQEAENSKSINLKDFFGAYTMDVITGTLFGVNLDSLNNPQDPFLKNMKKL
LKLDFLDPFLLLISLFPFLTPVFEALNIGLFPKDVTHFLKNSIERMKESRLKDKQKHRVDFFQQMIDSQN
SKETKSHKALSDLELVAQSIIIIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNKAPVTYDAL
VQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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