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Report for CCDS56441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56441.1 Public Homo sapiens 6 ANKRD6 24 110 108 CCDS HistoryNCBI Gene:22881Re-query CCDS DB by CCDS ID:56441.1Re-query CCDS DB by GeneID:22881See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56441.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339746.9 ENSP00000345767.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339746.9Link to Ensembl Protein Viewer:ENSP00000345767.4Re-query CCDS DB by Nucleotide ID:ENST00000339746Re-query CCDS DB by Protein ID:ENSP00000345767
Original member Current member EBI ENST00000522441.5 ENSP00000430985.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522441.5Link to Ensembl Protein Viewer:ENSP00000430985.1Re-query CCDS DB by Nucleotide ID:ENST00000522441Re-query CCDS DB by Protein ID:ENSP00000430985
Original member Current member NCBI NM_001242809.2 NP_001229738.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001242809.2Link to Protein Sequence:NP_001229738.1Re-query CCDS DB by Nucleotide ID:NM_001242809Re-query CCDS DB by Protein ID:NP_001229738Link to BLAST:NP_001229738.1
Original member Current member NCBI NM_001242811.1 NP_001229740.1 Accepted alive Link to Nucleotide Sequence:NM_001242811.1Link to Protein Sequence:NP_001229740.1Re-query CCDS DB by Nucleotide ID:NM_001242811Re-query CCDS DB by Protein ID:NP_001229740Link to BLAST:NP_001229740.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229738.1 727 Q9Y2G4-2 727 100% 0 0
NP_001229740.1 727 Q9Y2G4-2 727 100% 0 0

Chromosomal Locations for CCDS 56441.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 89566977 89567096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89595916 89596014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89603029 89603127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89606007 89606105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89612272 89612370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89613792 89613890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89616559 89616657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89617954 89618031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89621922 89622026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89623410 89623544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89623872 89624057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89624539 89624691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89627583 89627696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89629112 89629238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 89630433 89631004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2184 nt):
ATGAGCCAGCAAGATGCGGTCGCTGCACTTTCAGAGCGCCTTCTCGTAGCTGCGTACAAAGGCCAAACAG
AGAATGTGGTTCAGCTCATCAACAAGGGCGCCAGGGTAGCGGTTACCAAGCATGGCCGGACTCCCCTGCA
TCTTGCTGCCAATAAGGGCCATCTTCCTGTGGTCCAGATCTTGCTGAAGGCTGGCTGCGACCTTGATGTC
CAGGATGATGGGGACCAGACCGCCTTGCACCGGGCCACAGTGGTGGGGAACACGGAGATCATCGCGGCGC
TCATCCACGAAGGGTGTGCCCTGGACAGACAAGACAAGGATGGGAATACAGCCTTGCATGAAGCATCCTG
GCATGGTTTCAGCCAGTCAGCCAAGCTGCTCATTAAAGCAGGAGCCAACGTGCTTGCCAAGAACAAGGCG
GGGAACACAGCTCTGCACCTGGCCTGCCAGAACAGCCACTCCCAGAGCACGCGCGTCCTCCTGCTGGCCG
GGTCCCGCGCTGACCTCAAAAATAATGCAGGAGACACCTGTTTGCACGTTGCTGCGCGCTATAATCACTT
GTCCATCATTAGGCTCCTCCTCACTGCTTTCTGTTCTGTCCATGAAAAGAACCAGGCTGGAGACACAGCA
CTTCACGTTGCTGCTGCCCTAAATCACAAGAAGGTGGCCAAAATCTTACTGGAAGCCGGAGCAGATACGA
CCATTGTTAACAATGCAGGCCAGACTCCGCTGGAGACTGCCCGCTACCACAATAACCCGGAAGTTGCTCT
TCTCCTTACTAAAGCTCCCCAGGTCTTGCGCTTCAGTCGTGGGCGAAGCCTGAGGAAAAAGAGAGAGAGG
CTCAAGGAAGAGAGGAGAGCCCAGTCTGTGCCAAGAGATGAGGTGGCCCAAAGCAAGGGCAGTGTCTCAG
CAGGAGACACCCCCAGCAGTGAACAGGCTGTGGCCAGAAAAGAAGAAGCCAGAGAAGAGTTCCTGTCAGC
CTCCCCAGAACCCAGAGCAAAGGATGACAGGAGGAGAAAGTCAAGGCCCAAGGTGTCAGCATTTTCTGAC
CCCACCCCACCAGCCGACCAACAGCCTGGACACCAGAAGAACCTGCATGCTCATAATCACCCTAAAAAGA
GGAACAGGCATCGGTGTTCATCCCCACCCCCACCCCATGAGTTCAGGGCGTATCAGCTCTACACATTGTA
CCGGGGCAAGGATGGGAAAGTGATGCAGGCACCAATAAATGGTTGTCGATGTGAACCTCTAATCAACAAG
CTGGAGAATCAGTTGGAGGCTACTGTGGAGGAGATAAAAGCAGAGCTGGGATCGGTTCAGGACAAAATGA
ATACAAAGCTGGGGCAGATGGAGAATAAGACCCAGCACCAAATGCGTGTTTTGGACAAGCTGATGGTTGA
GCGACTTTCTGCAGAGAGGACGGAGTGCCTGAACCGCCTGCAACAGCACTCAGACACAGAGAAGCATGAG
GGGGAGAAACGACAGATATCCTTGGTGGATGAATTAAAAACCTGGTGCATGTTAAAGATTCAGAATCTGG
AGCAGAAGCTTTCTGGAGATTCTAGGGCCTGCAGAGCTAAATCCACACCATCTACTTGTGAGTCCTCTAC
AGGTGTGGACCAATTAGTGGTGACTGCAGGTCCAGCAGCAGCTTCCGACAGCTCCCCTCCAGTGGTTAGG
CCCAAAGAGAAGGCCCTCAACTCCACTGCTACCCAGAGACTCCAGCAGGAGCTGTCGTCTTCTGACTGTA
CAGGCTCCCGACTGAGAAACGTCAAGGTCCAGACAGCCTTGCTACCCATGAATGAGGCAGCCAGATCTGA
TCAGCAGGCTGGGCCCTGCGTCAACAGAGGCACTCAAACTAAGAAGTCTGGGAAGAGTGGGCCAACAAGG
CATCGTGCCCAGCAACCCGCAGCCAGCAGCACCTGTGGGCAGCCGCCACCAGCCACAGGCAGCGAGCAGA
CTGGCCCTCACATTCGGGACACCTCCCAAGCTCTGGAGCTTACCCAGTATTTTTTTGAGGCTGTTTCTAC
CCAGATGGAAAAGTGGTATGAAAGGAAGATTGAAGAAGCACGAAGCCAAGCCAATCAGAAAGCCCAGCAA
GATAAGGCTACATTGAAGGAACACATTAAAAGTTTAGAAGAGGAACTTGCCAAACTAAGGACTAGGGTGC
AGAAGGAAAATTAG

Translation (727 aa):
MSQQDAVAALSERLLVAAYKGQTENVVQLINKGARVAVTKHGRTPLHLAANKGHLPVVQILLKAGCDLDV
QDDGDQTALHRATVVGNTEIIAALIHEGCALDRQDKDGNTALHEASWHGFSQSAKLLIKAGANVLAKNKA
GNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHEKNQAGDTA
LHVAAALNHKKVAKILLEAGADTTIVNNAGQTPLETARYHNNPEVALLLTKAPQVLRFSRGRSLRKKRER
LKEERRAQSVPRDEVAQSKGSVSAGDTPSSEQAVARKEEAREEFLSASPEPRAKDDRRRKSRPKVSAFSD
PTPPADQQPGHQKNLHAHNHPKKRNRHRCSSPPPPHEFRAYQLYTLYRGKDGKVMQAPINGCRCEPLINK
LENQLEATVEEIKAELGSVQDKMNTKLGQMENKTQHQMRVLDKLMVERLSAERTECLNRLQQHSDTEKHE
GEKRQISLVDELKTWCMLKIQNLEQKLSGDSRACRAKSTPSTCESSTGVDQLVVTAGPAAASDSSPPVVR
PKEKALNSTATQRLQQELSSSDCTGSRLRNVKVQTALLPMNEAARSDQQAGPCVNRGTQTKKSGKSGPTR
HRAQQPAASSTCGQPPPATGSEQTGPHIRDTSQALELTQYFFEAVSTQMEKWYERKIEEARSQANQKAQQ
DKATLKEHIKSLEEELAKLRTRVQKEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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