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Report for CCDS56331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56331.1 Public Homo sapiens 4 UGT2A2 24 110 108 CCDS HistoryNCBI Gene:574537Re-query CCDS DB by CCDS ID:56331.1Re-query CCDS DB by GeneID:574537See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000604629.6 ENSP00000475028.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000604629.6Link to Ensembl Protein Viewer:ENSP00000475028.2Re-query CCDS DB by Nucleotide ID:ENST00000604629Re-query CCDS DB by Protein ID:ENSP00000475028
Original member Current member NCBI NM_001105677.2 NP_001099147.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001105677.2Link to Protein Sequence:NP_001099147.2Re-query CCDS DB by Nucleotide ID:NM_001105677Re-query CCDS DB by Protein ID:NP_001099147Link to BLAST:NP_001099147.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099147.2 536 P0DTE5-1 536 100% 0 0

Chromosomal Locations for CCDS 56331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 69589372 69589651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69594477 69594696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69595162 69595249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69596250 69596381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69599246 69599394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 69638899 69639640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1611 nt):
ATGGTTTCCATAAGGGATTTTACCATGCCTAAGAAGTTTGTCCAGATGCTGGTTTTTAATTTGACTCTGA
CTGAAGTTGTTCTAAGTGGGAATGTGTTAATTTGGCCTACAGATGGTAGCCATTGGTTAAATATTAAGAT
TATTCTAGAAGAGTTGATTCAAAGAAATCACAATGTGACTGTACTGGCTTCATCAGCAACTCTATTCATC
AACTCCAATCCCGATTCTCCTGTGAATTTTGAAGTGATACCTGTTTCCTACAAGAAGAGCAATATAGATT
CCTTAATTGAGCATATGATAATGCTGTGGATTGACCATAGACCAACTCCTCTCACAATATGGGCTTTCTA
CAAAGAACTAGGAAAACTTCTAGACACTTTCTTTCAAATTAACATACAACTCTGTGATGGTGTACTAAAG
AACCCAAAGTTGATGGCAAGACTTCAGAAAGGTGGTTTTGATGTGTTGGTAGCAGACCCAGTAACAATCT
GTGGTGATCTTGTTGCTCTGAAATTAGGAATTCCATTTATGTACACATTGAGGTTCTCTCCAGCATCAAC
AGTGGAGAGACACTGTGGGAAAATCCCAGCACCAGTCTCCTATGTACCGGCAGCCTTATCAGAGCTCACT
GACCAGATGACCTTTGGTGAAAGGATTAAAAATACCATATCTTATTCTCTGCAAGACTATATATTTCAGT
CCTACTGGGGAGAATGGAATTCATACTATAGCAAAATTTTAGGAAGACCCACTACGTTATGTGAGACTAT
GGGGAAAGCTGAAATTTGGTTAATCCGAACATATTGGGATTTTGAATTTCCTCGTCCATACTTACCTAAT
TTTGAGTTTGTTGGAGGATTGCACTGCAAACCTGCCAAACCTTTACCTAAGGAAATGGAAGAATTTATCC
AGAGCTCAGGTAAAAATGGTGTTGTGGTGTTTTCTCTGGGATCAATGGTCAAAAACCTTACAGAAGAAAA
GGCCAATCTTATTGCCTCAGCCCTTGCCCAGATTCCACAGAAGGTTTTATGGAGATACAAAGGAAAGAAA
CCAGCCACATTAGGAAACAATACTCAGCTCTTTGATTGGATACCCCAGAATGATCTTCTTGGACATCCCA
AAACCAAAGCTTTTATCACTCATGGTGGAACTAATGGGATCTACGAAGCTATTTACCACGGAGTCCCTAT
GGTGGGAGTTCCCATGTTTGCTGATCAGCCTGATAACATTGCTCACATGAAGGCCAAAGGAGCAGCTGTG
GAAGTGAACCTAAACACAATGACAAGTGTGGATTTGCTTAGCGCTTTGAGAACAGTCATTAATGAACCTT
CTTATAAAGAGAATGCTATGAGGTTATCAAGAATTCACCATGATCAACCTGTAAAGCCCCTGGATCGAGC
AGTCTTCTGGATCGAGTTTGTCATGCGCCACAAAGGAGCCAAGCACCTTCGGGTTGCAGCCCATGACCTC
ACCTGGTTCCAGTACCACTCTTTGGATGTAATTGGGTTCTTGCTGGTCTGTGTGACAACGGCTATATTTT
TGGTCATACAATGTTGTTTGTTTTCCTGTCAAAAATTTGGTAAGATAGGAAAGAAGAAAAAAAGAGAATA
G

Translation (536 aa):
MVSIRDFTMPKKFVQMLVFNLTLTEVVLSGNVLIWPTDGSHWLNIKIILEELIQRNHNVTVLASSATLFI
NSNPDSPVNFEVIPVSYKKSNIDSLIEHMIMLWIDHRPTPLTIWAFYKELGKLLDTFFQINIQLCDGVLK
NPKLMARLQKGGFDVLVADPVTICGDLVALKLGIPFMYTLRFSPASTVERHCGKIPAPVSYVPAALSELT
DQMTFGERIKNTISYSLQDYIFQSYWGEWNSYYSKILGRPTTLCETMGKAEIWLIRTYWDFEFPRPYLPN
FEFVGGLHCKPAKPLPKEMEEFIQSSGKNGVVVFSLGSMVKNLTEEKANLIASALAQIPQKVLWRYKGKK
PATLGNNTQLFDWIPQNDLLGHPKTKAFITHGGTNGIYEAIYHGVPMVGVPMFADQPDNIAHMKAKGAAV
EVNLNTMTSVDLLSALRTVINEPSYKENAMRLSRIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRVAAHDL
TWFQYHSLDVIGFLLVCVTTAIFLVIQCCLFSCQKFGKIGKKKKRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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