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Report for CCDS5633.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5633.1 Public Homo sapiens 7 GNGT1 24 110 108 CCDS HistoryNCBI Gene:2792Re-query CCDS DB by CCDS ID:5633.1Re-query CCDS DB by GeneID:2792See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5633.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248572.10 ENSP00000248572.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000248572.10Link to Ensembl Protein Viewer:ENSP00000248572.5Re-query CCDS DB by Nucleotide ID:ENST00000248572Re-query CCDS DB by Protein ID:ENSP00000248572
Original member Current member EBI ENST00000429473.1 ENSP00000388777.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000429473.1Link to Ensembl Protein Viewer:ENSP00000388777.1Re-query CCDS DB by Nucleotide ID:ENST00000429473Re-query CCDS DB by Protein ID:ENSP00000388777
Original member Current member NCBI NM_001329426.2 NP_001316355.1 Accepted alive Link to Nucleotide Sequence:NM_001329426.2Link to Protein Sequence:NP_001316355.1Re-query CCDS DB by Nucleotide ID:NM_001329426Re-query CCDS DB by Protein ID:NP_001316355Link to BLAST:NP_001316355.1
Original member Current member NCBI NM_021955.5 NP_068774.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021955.5Link to Protein Sequence:NP_068774.1Re-query CCDS DB by Nucleotide ID:NM_021955Re-query CCDS DB by Protein ID:NP_068774Link to BLAST:NP_068774.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316355.1 74 P63211 74 100% 0 0
NP_068774.1 74 P63211 74 100% 0 0

Chromosomal Locations for CCDS 5633.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 93906747 93906842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 93910790 93910918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (225 nt):
ATGCCAGTAATCAATATTGAGGACCTGACAGAAAAGGACAAATTGAAGATGGAAGTTGACCAGCTCAAGA
AAGAAGTGACACTGGAAAGAATGCTAGTTTCCAAATGTTGTGAAGAAGTAAGAGATTACGTTGAAGAACG
ATCTGGCGAGGATCCACTGGTAAAGGGCATCCCAGAGGACAAAAATCCCTTCAAGGAGCTCAAAGGAGGC
TGTGTGATTTCATAA

Translation (74 aa):
MPVINIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPEDKNPFKELKGG
CVIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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