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Report for CCDS56203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56203.1 Public Homo sapiens 20 ZGPAT 24 110 108 CCDS HistoryNCBI Gene:84619Re-query CCDS DB by CCDS ID:56203.1Re-query CCDS DB by GeneID:84619See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56203.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357119.8 ENSP00000349634.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357119.8Link to Ensembl Protein Viewer:ENSP00000349634.4Re-query CCDS DB by Nucleotide ID:ENST00000357119Re-query CCDS DB by Protein ID:ENSP00000349634
Original member Current member NCBI NM_001195654.2 NP_001182583.1 Accepted alive Link to Nucleotide Sequence:NM_001195654.2Link to Protein Sequence:NP_001182583.1Re-query CCDS DB by Nucleotide ID:NM_001195654Re-query CCDS DB by Protein ID:NP_001182583Link to BLAST:NP_001182583.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182583.1 502 Q8N5A5-3 502 100% 0 0

Chromosomal Locations for CCDS 56203.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 63708581 63709164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63733219 63733352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63733587 63733712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63734705 63734824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63735159 63735564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63735781 63735919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1509 nt):
ATGGACGAGGAGAGCCTGGAGTCGGCCTTGCAGACCTACCGTGCGCAGCTGCAGCAGGTGGAGCTGGCCT
TGGGCGCCGGCCTGGATTCGTCTGAGCAGGCTGACCTGCGCCAGCTGCAGGGGGACCTGAAGGAGCTCAT
CGAGCTCACCGAGGCCAGCCTGGTGTCTGTCAGGAAGAGCAGCTTGTTGGCCGCGCTGGACGAAGAGCGC
CCGGGCCGCCAGGAAGATGCTGAGTACCAGGCTTTCCGGGAGGCCATCACTGAGGCGGTGGAGGCACCAG
CAGCGGCCCGTGGGTCCGGATCAGAGACCGTTCCTAAAGCAGAGGCGGGGCCAGAATCTGCGGCAGGTGG
GCAGGAGGAGGAAGAGGGAGAGGACGAGGAAGAGCTGAGTGGGACAAAGGTGAGCGCGCCCTACTACAGC
TCCTGGGGCACTCTGGAGTATCACAACGCCATGGTGGTGGGAACGGAAGAGGCGGAGGATGGCTCGGCGG
GTGTCCGTGTGCTTTACCTGTACCCCACTCACAAGTCTCTGAAGCCGTGCCCGTTCTTCCTGGAGGGAAA
GTGCCGCTTTAAGGAGAACTGCAGGTTCTCCCATGGGCAGGTGGTCTCTCTGGATGAGCTGCGCCCCTTC
CAGGACCCAGACCTGAGCTCCCTGCAGGCCGGCTCTGCGTGTCTGGCCAAGCACCAGGATGGCCTCTGGC
ACGCAGCACGCATCACCGATGTGGACAACGGCTACTACACAGTCAAGTTTGACTCGCTGCTGCTGAGGGA
GGCCGTGGTGGAGGGGGACGGCATCCTGCCCCCACTGCGCACAGAGGCCACAGAGTCCGACTCAGACAGC
GACGTGGTGGGGTCAGATGCTGTGGACTCTGGGACCTGCAGCTCTGCCTTTGCTGGCTGGGAGGTGCACA
CGCGAGGTATAGGCTCCAGACTCCTCACCAAGATGGGCTATGAGTTTGGCAAGGGTTTGGGCCGACACGC
GGAAGGCCGGGTGGAGCCCATCCATGCTGTGGTGTTGCCTCGAGGGAAGTCGCTGGACCAGTGTGTGGAG
ACCCTGCAGAAGCAGACCAGGGTTGGCAAGGCTGGCACCAACAAGCCCCCCAGGTGCCGGGGAAGAGGGG
CCAGGCCTGGGGGCCGCCCAGCTCCTCGGAATGTGTTTGACTTCCTCAATGAAAAGCTGCAAGGTCAGGC
TCCTGGGGCCCTAGAAGCCGGGGCGGCCCCAGCGGGGAGGAGGAGCAAGGACATGTACCATGCCAGCAAG
AGTGCCAAGCGGGCCCTGAGCCTGCGGCTCTTCCAGACTGAGGAGAAGATCGAGCGAACCCAGCGGGACA
TCAGGAGCATCCAGGAGGCTCTCGCCCGCAACGCTGGCCGGCATAGCGTGGCGTCAGCCCAGCTGCAGGA
GAAGCTGGCAGGAGCCCAGCGCCAGCTGGGGCAGCTCCGGGCTCAGGAAGCCGGCCTGCAGCAGGAGCAG
AGGAAGGCAGACACCCACAAGAAGATGACTGAGTTCTAG

Translation (502 aa):
MDEESLESALQTYRAQLQQVELALGAGLDSSEQADLRQLQGDLKELIELTEASLVSVRKSSLLAALDEER
PGRQEDAEYQAFREAITEAVEAPAAARGSGSETVPKAEAGPESAAGGQEEEEGEDEEELSGTKVSAPYYS
SWGTLEYHNAMVVGTEEAEDGSAGVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSLDELRPF
QDPDLSSLQAGSACLAKHQDGLWHAARITDVDNGYYTVKFDSLLLREAVVEGDGILPPLRTEATESDSDS
DVVGSDAVDSGTCSSAFAGWEVHTRGIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKSLDQCVE
TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPRNVFDFLNEKLQGQAPGALEAGAAPAGRRSKDMYHASK
SAKRALSLRLFQTEEKIERTQRDIRSIQEALARNAGRHSVASAQLQEKLAGAQRQLGQLRAQEAGLQQEQ
RKADTHKKMTEF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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